| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0028 |
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| Symbol | |
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| ID | 3923484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 45870 |
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| End bp | 46526 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637895679 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_501525 |
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| Protein GI | 88601347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGA TATCCTTCAT CTTTGACATT ATGGTCCCGG CCTTTGCAAA TGGCCTGCTC
ATAACTCTGG CGCTTGTTGC TATTACTGCA CCCATTGGTT TTCTTCTCGG GGTTGGAGTT
GCATGCGGGC GGGTGTATGG TGGAAAAGGT CTTTCCTGGC TGATGCACAT ATACACCATA
TTTTTCAGGG GTTGCCCATT ATTACTGCTC CTTTTTATTC TGTATTTCGG ACTACCTTCA
GTTGGTATTG TTCTGACCCC CTTTGTTGCC TCAGTTCTGG GATTTATATT CTGCAATAGT
GCCTATAATT CAGAATATAT CAGAGGCTCA ATATTATCAG TAAAAGAAGG TCAATTAATC
GCTGCAAAAG CACTTGGTAT GACAAAGAAT CAGGCTATTT TAAATATTGT ATTACCCCAG
GCATTACGTC GGTCAATACC AGGGATTTCG AATGAATTTA TTTATCTTAT AAAATATTCA
TCGCTGGCTT ATATGATCAC CGTGATTGAA TTAACCGGTG CAAGCAAGCT TATTGCAACC
AAATATTTTG CATACAATGA AACCTTCATC GCCGTTGCGA TTGTGTACCT TCTTCTGGTA
ACCATCACAA CGTTCGGGGC AAATGCTTTG GAGAAAAAAT ATGCAATTCC GGGATGA
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| Protein sequence | MDQISFIFDI MVPAFANGLL ITLALVAITA PIGFLLGVGV ACGRVYGGKG LSWLMHIYTI
FFRGCPLLLL LFILYFGLPS VGIVLTPFVA SVLGFIFCNS AYNSEYIRGS ILSVKEGQLI
AAKALGMTKN QAILNIVLPQ ALRRSIPGIS NEFIYLIKYS SLAYMITVIE LTGASKLIAT
KYFAYNETFI AVAIVYLLLV TITTFGANAL EKKYAIPG
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