Gene Mhun_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0025 
Symbol 
ID3924806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp35214 
End bp38654 
Gene Length3441 bp 
Protein Length1146 aa 
Translation table11 
GC content47% 
IMG OID637895671 
Productchromosome segregation protein SMC 
Protein accessionYP_501522 
Protein GI88601344 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.962242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATATCA CACAACTTGA AATAGATAAC TTCAAATCTT TTGGGAGAAA AACAAAAATC 
CCATTTTTAC CAGGATTTAC AGTAATTTCC GGACCGAATG GTTCAGGAAA AAGCAATATT
ATTGATAGTA TCCTTTTTGT TCTTGCCCTT TCTTCATCCA GGCATCTTCG TGCAGAGAAA
CTGACTGATC TCATCAATCT GAACACCGAT AGAAATACCG CTGAAGTTGA GATCACCTTC
TCTGACGGGA CGAATATCCG GCGTCGTATC AAGAGAACCG AAAACACCTA TTATAATTAT
CTGTATCTGA ATGGACGCTC CTGCAGGCAG GGGGAGCTTC TGGACTTTCT TGCGGGTCAT
GGAATTGTCC CCCATGGGTA TAATGTGGTC ATGCAGGGGG ACATCAACCG CATTATTGAG
ATGAGTGATA ATGAACGGAG AAAGATTATA GATGAGATAG CCGGCGTTGC CGAGTTTGAT
TCAAAGAAAG ATATGGCCCT TTCCGAACTC TCACAGGTCA GAGAGCGAAT GACCGAAGAG
TCGGTTCACA TTGAGGAGCT GAGTGTCAGG CTTGCTCAGC TGGAGAAACA GAAAGAACAG
GCTGTTTCCT ATCGGAAATT ACAGGATGAA CTGAAATATC TGACAATGTG CCGGTCAGCC
GCACGACTAT CTGCCCGAAA GAAGGATCAG GATGCACTTC TGCAGTCAAT AGCCGAAGAA
AAAAGTCAGG TTGTACAGAT TGAGGCAGAT ATCTCATGGA AGTCTCATGA ACGGGATTTT
ATCAGGGATG AGATTGCGGA GATAGATCAG AAGATTGCCG CCAGGACTGG AAGTGAATAT
ATGGCTCTGG TGTCCAGGAT TGCTGAGGCA AAGGCTGCAA TTGATGGATT TTATCGTTCG
ATAGATCGGG CCGGACGAGA CAAGGAGGAA GCGAATAAAA GGCTTTCTGA TGTTTTCACG
GATGTAAAGC GACAGGAAGA GCGTATACAG GCCCTTGATA CCGAAATGCG GAACCTGATG
ATTGACCGGA CCAATCTCTC TATGACGGCA TCTGCAGTAC AAAAGGAGTT TGATCGCATA
TCGCAGGCAA TAGCCCAGGA GACGAAAGGT CTTGAAGAAG AGGAGGCTCG ACTGGAAAAC
CTGCGTTCAG AGATTCACAA AATCCGCGAA GAACGGGGTG AATTACTGCA TCAACAGGAT
ATTCTCATTG AACGGTCACG GATGCGAAGC GCTGAAGAAG ACCGCCTTAC CTCCCGTATA
ATTGCGATAG ACAAAGACAT CCGGGAGAAG GATGAGGATA TCGCAGGTCT TACCACGGCA
TTATCCCGGC TTACCGAAGA GAAGAAAGAG CATGATCGGA TGATGGCCGC TCTTGATACT
GCTCTTTATA CGAAACGTGA AGAGCATGAT CGACTGATTC GACAGATCCG GGATCTTAAA
GTTGAAATCG GGAGAAAAGA AGCGCAGCAA CAGGCCCAGG GTCGGTATAA TCGCGCGATG
GAAGCAGTTC TCGGGATGGA CGGGGTGTAT GGCACTATTG GAGATCTTGC AACCTGTAAA
CCTGAATATG CGAATGCACT GACTATTGCA GCTGGAGGAA AGATCCATTT TGTTGTTGTA
GAAACAGATC AAATTGCTGC GGATGCAATC CGGTACCTGC AGGAGCATAA ACTGGGTCGG
GTAACATTTC TCCCATTAAA TAAGCTCAGG CCAAAACCGC TTCCTTCTCT GCCACCAGGA
TCAGATGTTC TGGGATTTGC TCTGGATCTG CTTGATTATG ATCCCCGGTT TGATGCAGCC
TTCAGGGTTG TATTCGGTTC CACCATAGTT ATTGATACCC TTGACCATGC ACGTAAACGG
ATTGGTTCAT CACGCATGGT GACGCTTGAT GGCTCGCTGC TTGAACCATC AGGAACAATG
ACCGGAGGAA GTATAAAGAA AGATGCCGGC GGGTTTGGGA CGACATCGGT TGATGAGGTG
AAGCATCTTT CATCCCAATT AGCTGCTCTG ACTGCAGATG AGCAGGCACT GTCCGAGTCA
TTGAAAGCTG ATACCACAGA GCGTGATTCT GTACAGAGCC GGAGACTGGA ACTTGAAGGT
GCCATTGTCA GGGCGAAAGG ACAATTGGAA TCTGCAGAAT CAGCAAAGGT TAATCTCCTT
TCCGAGAAGG ATTCTCTTCA GAAACAGCGT GAAGCAGCAG GCGGGGGAGG CGGTGGCAGT
TCTCTTGAAC TTGCAACAGT TGAAGCTGCA ATAGAAGAGA AGAATCAGAC TCTTGCGGGA
ATTCAGAAAG CGATTCAGGA TATCACTGAT CATCTGTCAG AAACCGGCAT TCCTCAACTC
TACGAACAAC GTGAAGAGGC AGAACGACAG ATCACCGAGA TACAGAGGAG GCTGCATAAT
AAGGAACAGG AGATCAACGA AATCCGGTTG GAGATTGGGT TTGCCCAGAA AAAAGTTGAG
GAAGAACGTC AGCAGATGGA GCGTATCCGG GAACAGATGA AACGGTACGA GGAAGAGATA
CGCGAGTGTC ATGACGAGAT TGCGAAGAAG CAACAGGATA TCAAGGATGC CGAGACAACA
GTAGCCAAGT TCTCCCAGGA GATAGAGGAT CTCCGGTCAG AGCGTTCATT ACTTTCAAAC
AAGGCAGACT CCTTTGATCT GGAGATTCGC GAGTTTTCAG GGAAAAAGGA TCGGGTTCTG
CTGAAAATAG AGAGTATGGA GGAGAAATTA TCTGCTCTGA AATCGGAAAT TGCAGAGCTG
GTAACCGAAG CAGGTGAGTG CAGAACCGAT TTAAGTGAAG AGGAGATTGA AGACCGGTCA
CAGAAGACAA TCGTCGCCAT TGAACGTCTT GGGGATGTCA ATATGCGGGC CATAGAGGAG
TATGAACAGG TCCATGCAGT TGTTGCGGAA CGAATGTCCA GGGTTGAAAC GTTAAAACGG
GAGATGAATG ATATTCAGGA ACGGATAGAA TTTTTCTCAA AGAAAAAGTA TGAAGCCTTT
CAGGATGCGT TCACATCTAT AGATGCCAAT TTCAGGGATA TCTTCTCACG CCTTACCATG
GGTTCCGGAG AACTCAGGCT TGAAAACCCC GATGATCCCT TTACTGGTGG TCTGTCTTTT
GCAGTCCAGC CACGTGATAA AAAAGTGCAC CATCTCTCTG CACTCTCCGG TGGTGAAAAG
TCGCTTACAA CGCTTGCCTT TATCTTTTCA ATACAGAAAT ACATCCCTGC GCCATTTTAT
GCATTTGATG AAGTGGATAT GAATCTTGAT GGATCAAACG TAGTGCGGAT AGCAGAGATG
ATCCGGGAGT TATCAGGAAC GTCACAATTT ATTAACATCT CTCTTCGAAA ACCGATGATT
GATTCTGCAG ACCGAATCCT CGGTGTGACT ATCCGGCCTG ACAAGACCAG TCTTGTGACC
GGGGTGAGTA TGGATGATTG A
 
Protein sequence
MHITQLEIDN FKSFGRKTKI PFLPGFTVIS GPNGSGKSNI IDSILFVLAL SSSRHLRAEK 
LTDLINLNTD RNTAEVEITF SDGTNIRRRI KRTENTYYNY LYLNGRSCRQ GELLDFLAGH
GIVPHGYNVV MQGDINRIIE MSDNERRKII DEIAGVAEFD SKKDMALSEL SQVRERMTEE
SVHIEELSVR LAQLEKQKEQ AVSYRKLQDE LKYLTMCRSA ARLSARKKDQ DALLQSIAEE
KSQVVQIEAD ISWKSHERDF IRDEIAEIDQ KIAARTGSEY MALVSRIAEA KAAIDGFYRS
IDRAGRDKEE ANKRLSDVFT DVKRQEERIQ ALDTEMRNLM IDRTNLSMTA SAVQKEFDRI
SQAIAQETKG LEEEEARLEN LRSEIHKIRE ERGELLHQQD ILIERSRMRS AEEDRLTSRI
IAIDKDIREK DEDIAGLTTA LSRLTEEKKE HDRMMAALDT ALYTKREEHD RLIRQIRDLK
VEIGRKEAQQ QAQGRYNRAM EAVLGMDGVY GTIGDLATCK PEYANALTIA AGGKIHFVVV
ETDQIAADAI RYLQEHKLGR VTFLPLNKLR PKPLPSLPPG SDVLGFALDL LDYDPRFDAA
FRVVFGSTIV IDTLDHARKR IGSSRMVTLD GSLLEPSGTM TGGSIKKDAG GFGTTSVDEV
KHLSSQLAAL TADEQALSES LKADTTERDS VQSRRLELEG AIVRAKGQLE SAESAKVNLL
SEKDSLQKQR EAAGGGGGGS SLELATVEAA IEEKNQTLAG IQKAIQDITD HLSETGIPQL
YEQREEAERQ ITEIQRRLHN KEQEINEIRL EIGFAQKKVE EERQQMERIR EQMKRYEEEI
RECHDEIAKK QQDIKDAETT VAKFSQEIED LRSERSLLSN KADSFDLEIR EFSGKKDRVL
LKIESMEEKL SALKSEIAEL VTEAGECRTD LSEEEIEDRS QKTIVAIERL GDVNMRAIEE
YEQVHAVVAE RMSRVETLKR EMNDIQERIE FFSKKKYEAF QDAFTSIDAN FRDIFSRLTM
GSGELRLENP DDPFTGGLSF AVQPRDKKVH HLSALSGGEK SLTTLAFIFS IQKYIPAPFY
AFDEVDMNLD GSNVVRIAEM IRELSGTSQF INISLRKPMI DSADRILGVT IRPDKTSLVT
GVSMDD