Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0023 |
Symbol | glyA |
ID | 3924804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 33312 |
End bp | 34622 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637895669 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_501520 |
Protein GI | 88601342 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGGA AAAATTATCC GGATTTACAA AACCATATTA CCCTTTTATG CCAGATGTGT ATGCACATGT CCTATCTGGA AACGACTGAT CCAGAAATTG CAGCGATCAT CGATAAAGAA ACCAACCGTC AGATAAACGG CCTTGAACTT ATTGCTTCAG AGAATGTCGT CAGCAGGGCA GTCCTTGAAG CTTCCGGTTC AATCATGACG AACAAATACG CAGAAGGGTA TCCGGGTAAA CGATACTACG GCGGATGTGA GTTCCATGAC ATGGCAGAAA ATCTGGCTCG CGACAGGGTT TGTTCCCTGT TTGGTGCAGA ACATGCAAAT GTTCAGCCAC ATTCCGGCAG CCAGGCAAAT ATGGCAGTAT ACTTTACTGT CCTCAAGCCA AGTGACAAGA TCCTTTCCAT GAACCTCTCA CAGGGTGGCC ATCTCTCCCA TGGGTCACCG GTGAACTTTT CAGGTATTAT CTATGAATCG CACCAATATG GTGTTGATTT AAAGACAGAG CGGATGGATT ATGGCACGAT CGCCGAGATG GCACGAACTA TCAAACCGAA GATTATTGTA TGCGGTGCGA GCGCCTACCC AAGAGAGATT GACTTTAAGG CCTTTGCTGA AATCTCAGAA GAGGTCGGAG CATACTGTGT TGCAGATATT GCGCATATTG CTGGTCTGTG TGCAACCGGC ATCCACCCAA GCCCGGTCGG TCTGACAACC TTTACCACTT CAACCACGCA TAAAACACTT CGTGGTCCCC GTGGTGGATT CATCCTCTGT GACAAGGAGT TTGCAGCACC AATTGACAAA GCAGTATTCC CCGGAATGCA GGGCGGACCC CTGATGCATA TCATTGCTGC AAAAGCAGTC TGTTTCAAGG AAGCATCCAC AAAAGAGTTC AAAAAATATT CAGAACAGGT TGTGAAGAAT GCACGGACGA TGGCTGAGAC TTTATCAGCA AACGGTGTCA GACTTGTATC AGGAGGAACC GACAACCATC TCTGTCTTCT TGACCTGACG AACTTTGGAA TTACCGGACT TGAGGCGGAA CAAGCTCTTG GAAATGCCGG GATTACCGTA AACAAGAACA CCATTCCAAA TGAGACCAAG AGCCCCTTTG TCACCAGCGG TCTTCGTGTC GGAACTCCCG CTGTTACCAG CCGGGGTATG AAGGAGAGTG AAATGAAACA GATCGGAGAA TGGATTGCAG CAATCATCCG TGACAGCAAG AATACCAGAC TTCAGGAAAC AATCAGGGAA GAAGTCAAAT CTCTTGCCAG CCAATATCCC CTCTACCCTG ATCTTACATG A
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Protein sequence | MTGKNYPDLQ NHITLLCQMC MHMSYLETTD PEIAAIIDKE TNRQINGLEL IASENVVSRA VLEASGSIMT NKYAEGYPGK RYYGGCEFHD MAENLARDRV CSLFGAEHAN VQPHSGSQAN MAVYFTVLKP SDKILSMNLS QGGHLSHGSP VNFSGIIYES HQYGVDLKTE RMDYGTIAEM ARTIKPKIIV CGASAYPREI DFKAFAEISE EVGAYCVADI AHIAGLCATG IHPSPVGLTT FTTSTTHKTL RGPRGGFILC DKEFAAPIDK AVFPGMQGGP LMHIIAAKAV CFKEASTKEF KKYSEQVVKN ARTMAETLSA NGVRLVSGGT DNHLCLLDLT NFGITGLEAE QALGNAGITV NKNTIPNETK SPFVTSGLRV GTPAVTSRGM KESEMKQIGE WIAAIIRDSK NTRLQETIRE EVKSLASQYP LYPDLT
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