| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0005 |
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| Symbol | |
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| ID | 3922950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 5172 |
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| End bp | 9371 |
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| Gene Length | 4200 bp |
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| Protein Length | 1399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637895654 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_501505 |
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| Protein GI | 88601327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.7049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC CTGGGTCAGA CCAATCGATT CCTGGATTTG AGGAGATACC CTATGAGGCT
TTTTTTTCAA ACGCACCAAT AGGTATCTTT GTTGCCGACG ACCAGGGCAG ATATCTCTTT
GTGAATGATG CTGCCTGCAC CATGACCGGG TATACCAGAG ATGAGCTCAT CGGAAAAAAC
CTCATACAGT TCGTCTACCC TGATGACCGG GAATTTGCAT ATAGACACTT CGCACAGGTC
AAGGAGACCG GATCTGCGGT AGGAGACTGC CGGTATGTTA CGAAGTCTAA AGAGATCAGA
TACTGGGAAG TAAAGGCAGT CAGAATTTCT GATACCTGTT ATATCGGATA TACCTCGGAT
ATTACCGATA AAAAACGATC AGAGCATGAA ATTGTACGGA AGAATGAGGA ACTTCAGGCA
ACTTTTGAAG AACTTTCATC AACCGAAGAG GAGCTGAAGC AGCAACTTGA AGAGATCCTC
TCGGCACAGG CAGAGATTGA AGAACGTGAG CAAAAATATC GCCTTTTATT CAACACCAGC
GAAGCAGGTA TTGCTCTGCA TGAAATTATC TGGAACGAAG AAGATGTTCC GGTTGATTAC
CGGTTCCTTG AAATAAACCC GGCATTTGAG AAGATTACCG GACTTTCAGC CAAAGATATC
ATCGGAAAGC GGGTAACTGA AGTCCTGCCC GGTGTGGAGT CATATTGGAT TGAAACATAC
GGAAAAGTAG CACGTACCGG AAAGACAGTG CATTTCGAGA ATTTCAGTCA TGAACTCGGA
AAATATTACG AGGTCACTGC ATACTCCCCG GTCAAGGGCC AGTTTGCAAC TCTGATTCAG
GATGTAACCG AGCGGAAGAA ACAGGAGATA CAGCTCAAAG AGACGAACAG CTTTCTTGAA
AATCTTATTA ATCATGCAAA TGTGCCCATT ATTGTCTGGG ATCCCTCATT CACCATTACG
CGAATAAATC ACGCATTCGA ACTTCTTATT GGGAAACCTG CAAATGAGAT CGTGGGAAAA
AAGCTCGAGA CCCTCTTCCC TCCTGATGAG GCAGAACGCT CGATGCGGCT CATCCAGACA
ACCCTTGAAG GGGTCAGGTG GGAGACCGCA GAAATTCCTC TTTTAAATAA AGATGGTGAG
ATAAAGACAG TCCTGTGGAA CTCGGCAACC ATTTATGATC CTGATGGGAT GACACCCCGT
GCAACTATCG CTCAGGGCAG GGATATTACC GCAGAACGGC AGCTAGAGCG GGAAAAAGAT
GAGGCTGCTG CCCAGATACA GGAAAATATT GCAAAACTGG CCATACTCAA TGACGGTATC
AGAAATCCCC TCACCATCAT CGCAACATTC ACTGAAATGG CTGCGGATAC ACAGACTGCA
GACCTCATTC TTGCAGAGAT AAGCAGGATA GATGAGATGG TAAATAGTCT TGACCGGGAG
TGGATAAAAT CAGAAAAGAT TCTGAACTTC CTGAAGAAGC ATGATTTCGA AAAGACCGGA
TTTGACATCA ACAAATACCC GGATGTATTA CCAGATATCC ATCAGAACGG TGAAAAATCG
GGTTTTAGCC CATCCGGCAG ATATGAACTC TTTATCGAAG AGCTCCAGGC ACAACTCTAT
ACCATCTTGG ACAGTATTGA TGCCCTGATT TATGTAGCAG ATATGGAGAC GTATGAAATC
CTCTACCTGA ATAAACAGGG TCGTTATATA TTTGGAAATA TCCTGGGCCA GAAATGTTAC
ACCTATTTCC AGAATAATGC AGATGGTCCC TGCCAGTTCT GCACAAACCA TCTCCTCGTT
GATGAAAAAG GGCCAACAGG TGTGTACCGG TGGGAATATT ATAATACCAG AACCGGAAGG
TGGTTTGACT GCCGGGACCG GGCTATCAGG TGGACGGACG GAAGACTTGT GCGACTGGAA
ATTGCTACAG ACATAACAGA GAAGAAGCAC AAAGAAGAAG AGATCAAAGA AAGTGAGGAA
CGATTCAGGA CTCTTGTCAA TGCAATACAG GAGACAATGT CTGTCATTGA CCGGGACGGG
ACATTCATCT ATGCAAATGC CACCGCAGCA AGGAATCTTT CAGGTAAGGA TCCATCGTTT
GTAATCGGAA AGAACATCAG GGATTTTGTA TCTGAAGAGA AAGCAGAAGA GTTGATTCAG
AATTACCGGA CAACCATTGA TACCGGCATT CCGTTTGCCG GTGAGGTTCC GGTAATGATG
CAGGGGGAGC TCAAATACTT TTATAACCGG CTGATTCCTT TCAGGTTTTC CCAGGATGAC
GAGCAGGCAG TGCTCTCCCT TTCCCTGGAT ATTACGAAGC AGCATGCAAT CAGGGAAGAG
CTGACTCTTC GGGAGGAGCA GTACCGGAGA ATAGTTGATA CTGCACAAGA GGGCATCTGG
CAGATGGATC GACAGAAGAA TACGGTATAT GTAAATCCAC GGATGGCAGA GATGCTCGGG
TTTACTCCTG AAGAGATGCT GGGGAAAAAT GTCACATCAT TTATGCCACC AGAGGAACTT
GATCATCATG CACAAAGGAT GATCCACCGG ATGCATGGAG AGAATGAGCG GTATGAACAG
GAGTTTGTGA AAAAGGATGG ATCCCGGATC TGGCTGCATG TATCAGCAAC CGCTCTGGTA
AATGCAGATG GAACGTTCAA CGGCTCTTTT GCGATGCTTA CCGACATTAC CGAACAAAAG
AGGGCAGAAA AGGCACTTAT TGAGAGTGAA ACCAGGTTTT ATGAACTCTT CAATAATCTG
CCTGTTGCAG TAGCCATTTA TCGGCCGGTA GATAACGGAA CTGATTTCAT CTTTACAGAC
TTTAATCGTG CAGGTGAACA GATTGAGAAA ATAGAAAGAA CAGACATTAT TGGGAGAAGT
GTTCTGGAAG TATTCCCCGG GGTCAGGGAT TTTGGTCTTT TTGAGGTTTT TCAGCGAGTA
TACGAGACTG GAATCCCTGA AAAATTTCCG ATCTCATTTT ACAAGGACAA CCGGGTGACC
GGATGGAGGG AAAATTATGT CTACAAACTT CCATCAGGAG AGATGGTCGC AATTTATGAA
GATATGACGG AGCGAAAACA GGCAGAACAT GAACTGTTCG TTCTCTCCCG TTCACTATCA
GAAGCGATGA AGATTGCAAA AATGGCAGCA TGGGAGTATG ATCTGAAGAC CGGGATGTTT
ACTTTTAATG ACTTGTTTTA TTCCATGCTC AAGATAACGG CTGCAGAGGC TGGTGGTTAC
CAGATGTCAG CTGATGAGTT TGCAGATAGG TTCATCGTCC CGGCATATGC CAGTCAGGTA
CGTGAGATAA TACAAAAGGC AGCAGAATCA TCTGATCCCG AATTCGAGAT GATAATCGAG
GGAGAGCTAC GCCGTCCGGA TAACAGCACC TTCTGGGTGA CCACCTGGCT GAAGACTGAC
CGGGATGATG CAGGAGAGAT TACCAGGCTC TTCGGGGTCA ACCAGGATAT TACCGAACGG
AAGGAGATGG AGACTAAACT GAAAGACTCC ACACAGAAGT TACTGCTCCT CACCCAGATC
AACCGACATG ACATCTTTAA TGAGCTGACG GCAATGCATC TCATGCATGA CCTTGCCCTT
GATACCAACG ACCTTACGGA GATCTACTCA CTTATCAAGA GATCTGAGGA AGGACTGCGA
AGGATTGAGA GAGTATTACA GTTTACCAAG GAGTACGATA ATTTTGCCTC CTCACAGAGT
TTGTGGATGG TCCTCCACCG GATCATAGAC TCGATTCGGG AAGAAGTTGC GGCAGGGGAT
ATCCTTTTTG AAAATTCTGT TCCGGAGAAC ATTGAGGTTT TTACAGATCC GATGATTCAA
AAAGTTTTCA AGGCCCTGTA TGAAAATGCT ATTCGACATG GACAGAACCT GACAAAAGTC
TGGTTTTACA CCCAGGAGCG TGAGGGAGGT CTGATAATTT ACTGCGAAGA TGACGGTGTA
GGAATTCCGG ATGTAGAGAA AGATGCAATT TTCAGATATG GCCATGGAAA ACATACGGGA
ATAGGTCTCT TTCTTGCGAG GGAGATGCTT TCGATAAACA GCCTGACCAT ATGCGAATCT
GGAATGGAAA CAAAGGGGTC CAGATTTGAA ATACATATCC CTAAGGGGAA ATGGAGATAT
AGAAGAAGTA CCTCCGATAC CACTACAAAT TCAGACAGAA GAGAGCATAC AGGAGAATAG
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| Protein sequence | MTDPGSDQSI PGFEEIPYEA FFSNAPIGIF VADDQGRYLF VNDAACTMTG YTRDELIGKN
LIQFVYPDDR EFAYRHFAQV KETGSAVGDC RYVTKSKEIR YWEVKAVRIS DTCYIGYTSD
ITDKKRSEHE IVRKNEELQA TFEELSSTEE ELKQQLEEIL SAQAEIEERE QKYRLLFNTS
EAGIALHEII WNEEDVPVDY RFLEINPAFE KITGLSAKDI IGKRVTEVLP GVESYWIETY
GKVARTGKTV HFENFSHELG KYYEVTAYSP VKGQFATLIQ DVTERKKQEI QLKETNSFLE
NLINHANVPI IVWDPSFTIT RINHAFELLI GKPANEIVGK KLETLFPPDE AERSMRLIQT
TLEGVRWETA EIPLLNKDGE IKTVLWNSAT IYDPDGMTPR ATIAQGRDIT AERQLEREKD
EAAAQIQENI AKLAILNDGI RNPLTIIATF TEMAADTQTA DLILAEISRI DEMVNSLDRE
WIKSEKILNF LKKHDFEKTG FDINKYPDVL PDIHQNGEKS GFSPSGRYEL FIEELQAQLY
TILDSIDALI YVADMETYEI LYLNKQGRYI FGNILGQKCY TYFQNNADGP CQFCTNHLLV
DEKGPTGVYR WEYYNTRTGR WFDCRDRAIR WTDGRLVRLE IATDITEKKH KEEEIKESEE
RFRTLVNAIQ ETMSVIDRDG TFIYANATAA RNLSGKDPSF VIGKNIRDFV SEEKAEELIQ
NYRTTIDTGI PFAGEVPVMM QGELKYFYNR LIPFRFSQDD EQAVLSLSLD ITKQHAIREE
LTLREEQYRR IVDTAQEGIW QMDRQKNTVY VNPRMAEMLG FTPEEMLGKN VTSFMPPEEL
DHHAQRMIHR MHGENERYEQ EFVKKDGSRI WLHVSATALV NADGTFNGSF AMLTDITEQK
RAEKALIESE TRFYELFNNL PVAVAIYRPV DNGTDFIFTD FNRAGEQIEK IERTDIIGRS
VLEVFPGVRD FGLFEVFQRV YETGIPEKFP ISFYKDNRVT GWRENYVYKL PSGEMVAIYE
DMTERKQAEH ELFVLSRSLS EAMKIAKMAA WEYDLKTGMF TFNDLFYSML KITAAEAGGY
QMSADEFADR FIVPAYASQV REIIQKAAES SDPEFEMIIE GELRRPDNST FWVTTWLKTD
RDDAGEITRL FGVNQDITER KEMETKLKDS TQKLLLLTQI NRHDIFNELT AMHLMHDLAL
DTNDLTEIYS LIKRSEEGLR RIERVLQFTK EYDNFASSQS LWMVLHRIID SIREEVAAGD
ILFENSVPEN IEVFTDPMIQ KVFKALYENA IRHGQNLTKV WFYTQEREGG LIIYCEDDGV
GIPDVEKDAI FRYGHGKHTG IGLFLAREML SINSLTICES GMETKGSRFE IHIPKGKWRY
RRSTSDTTTN SDRREHTGE
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