Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3329 |
Symbol | |
ID | 3915976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3548577 |
End bp | 3550715 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640446114 |
Product | penicillin-binding protein 1A |
Protein accession | YP_498598 |
Protein GI | 87201341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGAC GGGACATTCC CCGCCGCCCC GAAGGCGGCA GGTCCGCTCC GCAACCCTCC GGTCCCTCGG CGCTTCGCCG CTGGGTGGGA AGGCTGTTTG CCTGGGGCAT CGGATTCGCG CTGCTTGGCG CCATAGCGCT GATAGTGGCC GTCGCGGTCA CCGCGCGCTC GCTGCCCGGC TACCAGGAGC TGAAGTCCAG CCAGACCGGG CAGATGGTGG TCGTGCGGGC CGCCGACGGT TCCGAAATCG TGACGCTCGG CCCCAGCTAC GGCAAGTGGG TTCCCTATGA GCGCATCCCC GAGGTGATGA AGGACGCCAT GACCTCGGTC GAGGACAGGC GCTTCCGCAG CCACTGGGGC GTGGACCCGA TCGGGATCGT GCGATCGCTG ATGGTGCGCG TGGAGAGCGG CTACTGGAAG CAGGGCGGCT CGACCATCAC ACAGCAGCTT GCCCGCAACA TCTTCCTCAA CAATACCAAG ACCTTCGGCC GCAAGGCGCG GGAATGGGTG CTGGCGCTGG CGCTGGAGCA GAAGTTCTCG AAGGACCAGA TCCTCGAGCT GTACCTCAAC AAGGTCTACT TCGGCGGCGG CGCCTATGGC ATCGATTCGG CCGCACGCAA GTTCTTCGGC CATTCGGGCG AGGAGATCAC CCTGCCCGAG GCCGCGATCA TCGCCGGCCT GGTCAAGGCA CCGTCCCGCT ATTCGCCCAC GGCCGATGCC GATGCCGCCG TCGGTCGCGC CGGCGTGGTG CTGCAGACGA TGCAGGACAA CGGCGTGCTG ACCGCGCAGG AAGCCGCCGC CGTCGACCTC AGGAAGGTCA AGATGGTGGA GGACCGCGCC AGCCAGAACT CGGCGCGCTA CTTCACCGAC TGGGCGTTGC CGCAACTCGA CCTGATCCTG CCCGAGAACG ACCAGCCGAT CGAGGTTTGG ACCACGCTCG ATCCGGTGAT GCAGCGCGCC GCGACGAGCG CCATTGCCGG CTTCGCGCCG AAGGGCGCGC AAGGCGCGCT TGTCTCGGTG GACCGCGACG GCGCCGTCCT CGCGATGGTC GGCGGGACCG ACTACGTCAG CTCGAACTAC AACCGCGCGG TAAACGCCGT CCGCCAGCCG GGTTCGGCGT GGAAGCTGTT CGTCTACCTC GCCGCGCTCG AGGCCGGATA TACCCCCGAC GACCGCGTGG TCGACGAGCC GGTGACGATC GACGGCTGGA CGCCGCGCAA CGACGGCGCG CGCTATGCTG GCGAGATCGA CCTGCGCACC GCATTTGCCT ATTCCAAGAA CACCGTTGCA GCACAACTCG GCAACGAGGT GGGCTTCGGC GCGGTGGCCA ACATGGCACG GCGCTTCGGC ATCACCACGC CGATCAACAC CTTGCCCTCG ATGGTCCTTG GATCGTCGGA AGTTCGGGTG ATCGACATGG TCCGCGCCTT CGCCTCGGTC CAGGCCAAGG GCAATTCGGT GACCCCCTAT GGCATCCGCA AGGTGACGAC GACCGATGGC GAAGTGCTCT ACAAGCACCG CGCCGATGCC TCGCAGCAGC TCGTCCCGCC CTATGTCGCG GCGGGCATGA CCGATCTCAT GCAGACCGCG GTGAATATCG GCACTGGCCG CGCCGCGCAG ATCGGACGAC CCGTCGCAGG CAAGACCGGC ACCACCTCTT CCAACAAGGA CGGCTGGTTC CTCGGTTTCT CCAGTGGCAT CACCACGGGC GTATGGATGG GCCGTGACGA TGCCAAGCCG GTGCCCGGCC TCCAGGGCGG CGCCGCGCCC GCGCGCGCAT TCGCTGCCTA CATGAAGGTC GCCACGGCCA AGCGCCCGTC CGAAAAGTTC GATACCGAAC TCAAGCTGCC GCAATGGCAG CTCGAACCCG ACGACGAGGC GATGCAGGGC AATCCCGACG ATTACTTCTA TGTCGACGAA CAGGGCAACC TTGTGGACCC GTCACGTCGC CCATCGCCCG GCGCCAATCC CGACGCCGTC GATCCGGATG CGCTGCCCGA AGGCGTGCCC CCGGATGCGC CCCAGGCGGC GACCGACGAT TTCCTCAACC GCGCCACGGG GCGGCAGGGA GACACGCCAC CCGCGACAGG ACCGCGCACC CGTCCGACGA GCAGCGCCCG GACGGTGACC GTTCCCTGA
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Protein sequence | MARRDIPRRP EGGRSAPQPS GPSALRRWVG RLFAWGIGFA LLGAIALIVA VAVTARSLPG YQELKSSQTG QMVVVRAADG SEIVTLGPSY GKWVPYERIP EVMKDAMTSV EDRRFRSHWG VDPIGIVRSL MVRVESGYWK QGGSTITQQL ARNIFLNNTK TFGRKAREWV LALALEQKFS KDQILELYLN KVYFGGGAYG IDSAARKFFG HSGEEITLPE AAIIAGLVKA PSRYSPTADA DAAVGRAGVV LQTMQDNGVL TAQEAAAVDL RKVKMVEDRA SQNSARYFTD WALPQLDLIL PENDQPIEVW TTLDPVMQRA ATSAIAGFAP KGAQGALVSV DRDGAVLAMV GGTDYVSSNY NRAVNAVRQP GSAWKLFVYL AALEAGYTPD DRVVDEPVTI DGWTPRNDGA RYAGEIDLRT AFAYSKNTVA AQLGNEVGFG AVANMARRFG ITTPINTLPS MVLGSSEVRV IDMVRAFASV QAKGNSVTPY GIRKVTTTDG EVLYKHRADA SQQLVPPYVA AGMTDLMQTA VNIGTGRAAQ IGRPVAGKTG TTSSNKDGWF LGFSSGITTG VWMGRDDAKP VPGLQGGAAP ARAFAAYMKV ATAKRPSEKF DTELKLPQWQ LEPDDEAMQG NPDDYFYVDE QGNLVDPSRR PSPGANPDAV DPDALPEGVP PDAPQAATDD FLNRATGRQG DTPPATGPRT RPTSSARTVT VP
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