Gene Saro_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3305 
Symbol 
ID3915952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3523876 
End bp3524550 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID640446090 
Productpentapeptide repeat-containing protein 
Protein accessionYP_498574 
Protein GI87201317 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0582845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC CCGAACGCAC CGGCGCGACC CTCGGTCGCA GCGAACTTGC CCTTCTCGCC 
GGTGCGCCGG CACTCCTCGT CGAGTGCGAT CTGGAAGAAG CGGACCTGTC CAAGCTGGAC 
CTTTCCGGCT GGCGGTTCGA GCGCTGCAAC CTGCGCCATG CCGACCTGTC GGGCGCCAAT 
CTCGCGCGGA CGACATGGCA GTCGTGCAAG GCTGCCTTCG CCAATTTCGG CGCGGCGGAT 
CTTGCCGAAG CCGAATTGCG GGGGTGCGAC CTGAACAACG CGGTGCTGCG CCGGGCCAAC 
ATCGCCTCGG CGCGCTTCGT CGCCTCGCGC ATGACCGGCG CAGACTTTCA TGCGGCGCGC 
GGCATGGGCT TCGCGTTCGA GGAAGTCCTG CTGGTGAACG CGCGTCTGAC CGGGTTCTCG 
TTCCGCAAGG AGCGGCTCGT GCGCCTGGAT ATGGCGCAGG CGGATCTCGC GAAATGCGAT 
TTCCGGGGGG CCGTGCTGGA AGGCTGCTCG CTGCGCGAGG CGAACCTCGA CGGCGCGCAG 
TTCATGGGCG CGGACTTGCG CGGCGCTGAC CTTGGCGGGC TGAGGCTGGA AGATGCGGGG 
GTGTTCCGCG GCGCGATCAT CTCGCGCGAA CAGGCCGAGC AACTGCTGTC GGGATGGGGC 
CTGCTGATCC GCTGA
 
Protein sequence
MSIPERTGAT LGRSELALLA GAPALLVECD LEEADLSKLD LSGWRFERCN LRHADLSGAN 
LARTTWQSCK AAFANFGAAD LAEAELRGCD LNNAVLRRAN IASARFVASR MTGADFHAAR 
GMGFAFEEVL LVNARLTGFS FRKERLVRLD MAQADLAKCD FRGAVLEGCS LREANLDGAQ 
FMGADLRGAD LGGLRLEDAG VFRGAIISRE QAEQLLSGWG LLIR