| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3303 |
|---|
| Symbol | |
|---|
| ID | 3915950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3521752 |
|---|
| End bp | 3522489 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640446088 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_498572 |
|---|
| Protein GI | 87201315 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.140638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG CAACCTCTGC GAACACCATT CGCCCGGACG AAGCGGCGCA TTTCGGCAAG
CTTGCGGCAG ACTGGTGGAA CCCCAAGGGC TCGTCGGCCA TGCTGCACAA GCTCAATCCG
GTGCGGCTGG GCTTCATCCG CCAGGCGGTC GATTCGCACT TCGCCACCGA TCCGCGTGGG
CTGAGGCCGC TGGCTGGCCG GCGCGCACTG GATGTCGGGT GCGGCGCGGG CCTGCTATGC
GAACCGCTGG CGCGGCTTGG CGCGGAAGTG ACGGGCGTGG ATGCGGCTGC GGAAAACATC
GCCGCTGCGC GCCTCCACGC CGAAGGCGCC GGCTTTGCGA TCGACTACCG CTGCGGCGAC
CTTGGCCAGC TTGGCCTTTC GGGGTTCGAT CTGGTCACCT CGATGGAGGT CATCGAGCAT
GTCGCTGACA AGTCCGCCTT CGTCGCCGCG CTGGCGGGAG CATTGGCGGT GGGGGGGCTG
ATGGTCCTGT CCACCCCCAA TCGCACCACC CGTTCGCGCC TGCTCATGGT GGAAGGGGCG
GAGGCGGTCG GGCTGGTGCC CAGGGGCACG CACCACTGGG AGGATTTCGT GACCCCGGTC
GAACTCCACG ACCTGCTGGA CGCGGCGGGG CTGAGGATGG GCAATCCGAT GGGCATCGCC
TGGAGCGTCA GCCGGGGGCT GCACCTGTCG GATGACCTTG CGCTCAACTA CATCGTCACC
GCGACACGGA AGGATTGA
|
|---|
| Protein sequence | MSNATSANTI RPDEAAHFGK LAADWWNPKG SSAMLHKLNP VRLGFIRQAV DSHFATDPRG
LRPLAGRRAL DVGCGAGLLC EPLARLGAEV TGVDAAAENI AAARLHAEGA GFAIDYRCGD
LGQLGLSGFD LVTSMEVIEH VADKSAFVAA LAGALAVGGL MVLSTPNRTT RSRLLMVEGA
EAVGLVPRGT HHWEDFVTPV ELHDLLDAAG LRMGNPMGIA WSVSRGLHLS DDLALNYIVT
ATRKD
|
|---|
| |