Gene Saro_3294 details

Gene Information

• Locus tag: Saro_3294
• ID: 3915941
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 3515176
• End bp: 3515790
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640446079
• Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
• Protein accession: YP_498563
• Protein GI: 87201306
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0775] Nucleoside phosphorylase
• TIGRFAM ID: [TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0698119
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAGC CGACCCTGCT GGGCCGCAAG CGCACGCTGT TCGTCATGGC AGCGGCGCCC 
GAATACGGCC CACACCTGCG CGCCCGCTTC GTGCCGCTGA TCACCGGCAT AGGCCCGGTG 
GAGGCCGCGC TGCACACCGG CATCGCGCTC GCCCGGATGG AAGCGGCAGG CTCCCTGCCC 
GACCTCGTCG TCTGCCTCGG TTCAGCCGGA TCGCGGCGCT GCGCGCTCGG CTCGGTCCAT 
CAGGTCGGCC AGGTGTCCTG GCGCGACATG GACGCATCGC CGCTGGGCAT CGAACCCGGC 
ATCGTGCCCT ACCTCGACGA ACCGAAGGAC CTGACGCTCG AAACCCCGCT CGGCCTTCCT 
GTCGCATCGC TGTCGAGCGG CGGCGACGTT GTCAGCGGCG CGGGCTGGGA CGGCATCGAC 
GCCGACATGG TCGACATGGA AACCTACGCC GTCGCCCGTG CCGCGCGCAC TTTCGGCGTG 
CCGCTGGTGG GACTTCGAGG CGTATCGGAC GGCCCGGGCG AACTCGCGGG CGCGCACGAC 
TGGCACAAGC TGCTTGGCTA TCTCGACGGC GAACTGGCCA AGGCGGTGGA CCTGCTCGCG 
GCCCACTACG GCTAG 

 

Protein sequence

MVEPTLLGRK RTLFVMAAAP EYGPHLRARF VPLITGIGPV EAALHTGIAL ARMEAAGSLP 
DLVVCLGSAG SRRCALGSVH QVGQVSWRDM DASPLGIEPG IVPYLDEPKD LTLETPLGLP 
VASLSSGGDV VSGAGWDGID ADMVDMETYA VARAARTFGV PLVGLRGVSD GPGELAGAHD 
WHKLLGYLDG ELAKAVDLLA AHYG