| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3280 |
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| Symbol | |
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| ID | 3915927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 3499265 |
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| End bp | 3501388 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640446065 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_498549 |
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| Protein GI | 87201292 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0713327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCG TGAACAAGGG GACTACCGTG AACCGCATCG CCTGCCTGCT CCTCGCCGGA
ACCACGCTTG CGCCCGCCAG CGCCTTCGCC GTCGAGGCCG TGCCAGCGGA TGCCGCCTTC
GATGCCGAGA CGGCAGGTAC GGTGATCGTG GTGACGGGCA GCGCCGACGG CTATCGCCCG
GTAGACGCCA ACGCGGTCAA GACGCCCACC CCGCTGGTCG ACGTGCCCCA GACGATCACC
GTGCTGACGC GCGAACAGCT CGACGACCAG GCCGTGACCC AGCTTGGCGA TGCGCTGCGC
TATGTTCCCG GCGTCGTGCT GGGCCAGGGC GAGGGCCACC GCGACCAGAT CACCCTGCGC
GGCCAGAACA CCACCGCTGA CTTCTACCTC GATGGCCTGC GCGACGACAC GCAGTACTAC
CGCTCGCTCT ACAACATCGA GCGCGTCGAA GTGCTGAAGG GCGCCAATGC CCTGCTCTTC
GGTCGCGGCG GCGGCGGCGG CGTGATCAAC CGCGTGAGCA AGACCCCCGA CCTCGACCGC
ACCAAGGGCG AGGCGAGCGC GAATGTCGAC AGCTTCGGCG CCTTCGCGCT GGCCGCGGAC
TGGAACCAGC CGCTTGCCGA AAGCGTCGGC GGCCGCCTGA ATGCGACCTA CGAGGAGTTC
GACAACCACC GGCAGGATTT CGAGGGCCGC TTCATCGGCG TGAACCCCAC CCTGGCGTTC
GAGCCGGGCG AGGCGACGCG CGTCGAGCTG TCCTACAACT ATGACGACGA CCGCCGCACC
ACGGACCGCG GCGTGCCTTC GGTGGCAGCC ACGAAAAAGC CGCTCACCGG CCATGACGAC
ACGTTCTTCG GCCGCAACGA CGTCAACATC GCCACGGTGA AGGCGCACAT CGCGCAGGCG
CGCATCGACC ACGACCTTGC CGACGGGCTC AGCTTCAATG TGCTTGGCCA GTACAGCCAT
ACCGACAAGT ACTACGGCAA TGTCTTCGCC GGCAGTTCGG TGAACGACGC GGGCCAGCTC
ACCCTCTCGG GCTATTCCAG CGCAAACGTC CGCGAAAGCT GGGTCGGCCA GACCAACCTC
GTCTGGGAAG GCCACACCGG CCCCATCGGC CACACCGTGC TTGCCGGGCT CGAGATTTCG
AGCCAGGACA CCACCAGCCT GCGCTCCGAC CCGGACTTCG GCACTGCGAG CACCACGGTG
ACGCTGGCGA AGCGGATGAC GATTCCGGCG GTGACGTTCA AGGCGCCTTC GCGCTCGTCG
CTGAGCCGCG TCGATACCTG GTCGGCATAT TTCCAGGACC AGGTCGAGCT GGCCTCCTTC
CTCCAGGTCG TTGCGGGCAT CCGCTTCGAC GAATTCCGCA TCAATTCGAC CGACCGCATC
AATGCAACTT CCGCGCAGCG CACCGACCGC AAGTGGTCGC CGCGCTTCGG CGTGGTGCTC
AAGCCGCGCA AGGAGATGTC GTTCTACGCC AGCTTCACCC GCAGCTTCCT GCCGCAATCC
GGCGATCAGT TCGGGTCGCT CGACGCAACC CAGGCGACGC TCGCGCCCGA GCGTTTCGAG
AACCTGGAAG CAGGCGTAAA GTGGGACATC AACCCCGGCC TTGCCTTCAC TGCCGCAGCC
TACCGCCTCG ACCGCGAGAA CTCGCGCTTC AACAATCCAG TGACGGGCCT GCCCGAGCTT
TCGGGCAAGA CCCGGGCCAA GGGCATCGAA CTGCAACTGG CGGGACGCGT GCTGCCCGAC
TGGCAGGTCA GCCTCGGCTA CACGTTGCAG GACGGAGAAG TCCGGTCGCG CACCACGGCA
GCGCTGCCGG GTACCAAGCT GGCCCAGCTT CCGCGCCACC AGTTCGCCGC CTGGACGCGC
TATGACGTAA CCAGGCAGCT TGGCCTCGGC CTTGGCGTGA CGCACCAGTC GAAGAGCTTT
GCGACGATCA GCAACGCGGT GACGCTACCT GCCTTCACCC GCGTGGACGC GGCGGTGTTC
TACGACCTGT CCGAACGCTT CTCGATCCAG CTCAATGTCG AGAACCTGAC CGACACCGAC
TATTTCCCCT CGGCCCACAC CGACAACAAC ATCTCGACCG GCGAGCCGAT CAACGCCCGC
CTTTCGGTTC GCGTGAAATT CTGA
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| Protein sequence | MIIVNKGTTV NRIACLLLAG TTLAPASAFA VEAVPADAAF DAETAGTVIV VTGSADGYRP
VDANAVKTPT PLVDVPQTIT VLTREQLDDQ AVTQLGDALR YVPGVVLGQG EGHRDQITLR
GQNTTADFYL DGLRDDTQYY RSLYNIERVE VLKGANALLF GRGGGGGVIN RVSKTPDLDR
TKGEASANVD SFGAFALAAD WNQPLAESVG GRLNATYEEF DNHRQDFEGR FIGVNPTLAF
EPGEATRVEL SYNYDDDRRT TDRGVPSVAA TKKPLTGHDD TFFGRNDVNI ATVKAHIAQA
RIDHDLADGL SFNVLGQYSH TDKYYGNVFA GSSVNDAGQL TLSGYSSANV RESWVGQTNL
VWEGHTGPIG HTVLAGLEIS SQDTTSLRSD PDFGTASTTV TLAKRMTIPA VTFKAPSRSS
LSRVDTWSAY FQDQVELASF LQVVAGIRFD EFRINSTDRI NATSAQRTDR KWSPRFGVVL
KPRKEMSFYA SFTRSFLPQS GDQFGSLDAT QATLAPERFE NLEAGVKWDI NPGLAFTAAA
YRLDRENSRF NNPVTGLPEL SGKTRAKGIE LQLAGRVLPD WQVSLGYTLQ DGEVRSRTTA
ALPGTKLAQL PRHQFAAWTR YDVTRQLGLG LGVTHQSKSF ATISNAVTLP AFTRVDAAVF
YDLSERFSIQ LNVENLTDTD YFPSAHTDNN ISTGEPINAR LSVRVKF
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