Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3272 |
Symbol | |
ID | 3917531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3493098 |
End bp | 3493721 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640446057 |
Product | HAD family hydrolase |
Protein accession | YP_498541 |
Protein GI | 87201284 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACCG CAGGGGAAAC CATGGTGGAA GCCGTCGTCT GGGACATCGG GCGGGTGCTG GTCGAGTTCG ACCTTGCCGG AATCTACCAC GATGCGATCC CCGATCCGGC AGAGCGGGCC CGTTTCGTCA CGGAAGTGGT GACCGAGGAA TGGCACCTCC AGCACGATCT GGGCGTCTCC TTCGCCGAAA TGGTCGCCGC GCGCACGTCC GAATTTCCCC AGCACGCCGA TCTGATCGCC CGCTACGCCA GCCACTGGCT CGACAGCCTG CCTGGGCCTG TGCCGGGCAC GCACGATCTC GTCGCGCGCC TCGCCGCGCG AGCGGTGCCG CAATACGCGA TCACCAATTT CGGGGCCGAC GCCTGGGCTC TGTTCCAGCC CACGTTCCCG GTTCTCGATC ACATGCGCGA AATCGTTGTC TCCGGGATCG AGAAGCGCGC AAAGCCGGGC GAGGAGATCT TTCACCTCGC CGCCCGCCGC TTCGGTCACG ATCCCGCCGC GATGCTGTTC GTCGACGACA ATGCCGCCAA CATCGCCACT GCCCGCCGTC TCGGCTGGCA GGTCCATCAC TTCGCCGGCG CGGCAGCGCT CGAAGCAGCG CTTGCGGCCG AGGGGCTGCT CTAG
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Protein sequence | MGTAGETMVE AVVWDIGRVL VEFDLAGIYH DAIPDPAERA RFVTEVVTEE WHLQHDLGVS FAEMVAARTS EFPQHADLIA RYASHWLDSL PGPVPGTHDL VARLAARAVP QYAITNFGAD AWALFQPTFP VLDHMREIVV SGIEKRAKPG EEIFHLAARR FGHDPAAMLF VDDNAANIAT ARRLGWQVHH FAGAAALEAA LAAEGLL
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