Gene Saro_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3269 
Symbol 
ID3917528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3488827 
End bp3489675 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID640446054 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_498538 
Protein GI87201281 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA TGCTGATCTT CGGAATGGGT TACACCGCGC AGGTGCTGGC CCGTGCCCTG 
CGCGCGACCG GCTGGGAAGT GCACGGCACC GGCAGCGCGG GCGATATCGC CTTTGCCGAC
CGCGCCGCGG TCGAGGCTGC GCTTGCCGGG GCGAGCCACG TCCTTTCCTC CGTCCCGCCC
GCGCGAGAAG GCGGCGATCC TGTTCTCGAC AGTTACGGTC CGGCCATTGC CGCTTCGGGC
GTGGAATGGA TAGGCTATCT CTCGTCGACC GGCGTCTATG GCGATGCCGG CGGCGCGTGG
GTCGATGAAA GCGCGCCCGT CGGCACCGGT CGCCGCTCGG CCCGAACCGC CGCCGACCTT
GCCTGGCAGG CGCTTTCGCC CGAGGTCCGC GTGTTCCGCC TGCCCGGCAT CTATGGCCCG
GGCCGCAGCG CGCTCGACCG CGTGGCCGCG GGCAGGGCGC ACCGAATCGA TCTTCCCGAA
CAGGTGTTCA GCCGCGTCCA CGTGGAAGAC ATCGCCAGCG GCGTGATCGC ATCGTTCGAT
GGACCGCCCG GCGTCTACAA TCTGGCCGAC GACCTGCCCT GCGGCCAGAA CGCGGTGATC
GAGGAAGCCG CCCGCCTGCT CGGCGTCCCA CCCCCGCCGA TGCTCACGCT CGAGCAGGCG
AACCTCTCGC CGATGGCGCT GGCCTTCTAT GCCGAGAACC GCCGCGTCGC CAATGGCCGT
GCCCGGCGCC TGCTTGGCTG GAAACCCGCT TTTCCGACCT ACCGCGAGGG GCTGCGCGAC
CTGAGAGCCA GCACAAGGCC GACCATTGCC AGCGCCGCGC CCGCCAGCGC CAGCACCGAC
CAGCGATAG
 
Protein sequence
MGKMLIFGMG YTAQVLARAL RATGWEVHGT GSAGDIAFAD RAAVEAALAG ASHVLSSVPP 
AREGGDPVLD SYGPAIAASG VEWIGYLSST GVYGDAGGAW VDESAPVGTG RRSARTAADL
AWQALSPEVR VFRLPGIYGP GRSALDRVAA GRAHRIDLPE QVFSRVHVED IASGVIASFD
GPPGVYNLAD DLPCGQNAVI EEAARLLGVP PPPMLTLEQA NLSPMALAFY AENRRVANGR
ARRLLGWKPA FPTYREGLRD LRASTRPTIA SAAPASASTD QR