Gene Saro_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3237 
Symbol 
ID3917495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3458458 
End bp3459003 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID640446021 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_498506 
Protein GI87201249 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATCA TCGAATGCGA TATCGAGGGG CCGCTCGTTC TCGAACCGCG CGTGTTCGGC 
GACGAACGCG GCTTCTTCAT GGAAAGCTGG AACGCCGAGG CCTTTGCCAA GGCCGGGCTC 
GACCTTCCGT TCGTGCAGGA CAACCACAGT CGTTCGCAGA AGGGCGTGCT GCGCGGCATG 
CACTTCCAGA ACCCCGGGCC GCAGGGCAAG CTGGTCCGTG TCGTGCGCGG CGCCGTATTC 
GACGCAGTGG TCGACTTGCG CAAGTCCTCG CCAACTTTCG GCAAGTGGAC CGGGGTCGTC 
CTTTCGGCCG AGAACAAGCG CATGTTCTGG GTTCCGGAGG GCTTCGCCCA CGGGTTCCTG 
ACGCTCGAGG ACGATACCGA CTTCCTCTAC AAGTGCACCG CGCCCTACGC GCCGCAACAC 
GAATGCAGCC TGGCGTGGGA TGATCCGGAC GTTGGCATCG ACTGGCCCCT CGACGGGATC 
GAACCGAAGC TTTCCGCGAA GGATGCCGAC GGCGTAAGGC TTGCGGACGT GAAGGCCTTC 
GCGTGA
 
Protein sequence
MNIIECDIEG PLVLEPRVFG DERGFFMESW NAEAFAKAGL DLPFVQDNHS RSQKGVLRGM 
HFQNPGPQGK LVRVVRGAVF DAVVDLRKSS PTFGKWTGVV LSAENKRMFW VPEGFAHGFL 
TLEDDTDFLY KCTAPYAPQH ECSLAWDDPD VGIDWPLDGI EPKLSAKDAD GVRLADVKAF 
A