Gene Saro_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3236 
Symbol 
ID3917494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3457604 
End bp3458461 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content66% 
IMG OID640446020 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_498505 
Protein GI87201248 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCGC TGGTCACCGG CGTCGGCGGC CAGCTAGGCA GGGCACTGCT CGCGACTGCG 
CCCGAAGGTT GGACCTGTGT GGCGCTTGAC CGCGCTGCGC TCGATCTTGG CGATGCCGAT
GCCATCGCCC GCATCGTCGA GACGGAGCAG CCGGACCTCG TGTTCAATGC CGCGGCCTAT
ACCGCAGTGG ACAAGGCGGA AAGCGAGCCG GAATTGGCCA ACGCGATCAA CGCCGGTGCG
CCGGGCGCAT TCGCAAGGGC GCTGGCCGGA TCGGGCAAGC GCCTGGTACA GGTCTCGACC
GACTTCGTGT TCGATGGTGC CAGCGGACAC GGCTATCGGC CCGGCAATGC GCGCAACCCG
CAGTCCGTCT ATGGCGCGAG CAAGGCGGCG GGCGAAGATG CGGCGGGCGA TGACGCGATC
ATCGTGCGGA CGAGCTGGGT CTATGCCGCC GGCGGGGCGA ACTTCGTGCG CACCATGCTG
CGTCTCATGC GCGAGCGCGA AGAGCTGCGC GTTGTGGCCG ACCAGATCGG CTCTCCGACC
TGGGCGACGG GGTTGGCGCG GACGCTGTGG GGCCTTGCTG CGGCCGACAG GCCCGGCATC
TATCATCATC GCGATGCAGG CGTGGCGAGC TGGTACGACT TTGCCGTGGC CATCGCCGAG
GAAGCCCATG CCCTTGGGCT GATCGCGCGC ATTCCCGCCA TCGTCCCGAT CGCAACTTCC
GATTATCCGA CGCCGGCAAA GCGTCCTTCG TTCTCGGTGC TCGACGTCAG CGGTACGCGA
AGCCTGCTGG GCGACGCGCA CGTTCATTGG CGCACCAATC TCAAGACAAT GCTGAAAGAG
GAAAAGGCTC TTGTCTAA
 
Protein sequence
MKALVTGVGG QLGRALLATA PEGWTCVALD RAALDLGDAD AIARIVETEQ PDLVFNAAAY 
TAVDKAESEP ELANAINAGA PGAFARALAG SGKRLVQVST DFVFDGASGH GYRPGNARNP
QSVYGASKAA GEDAAGDDAI IVRTSWVYAA GGANFVRTML RLMREREELR VVADQIGSPT
WATGLARTLW GLAAADRPGI YHHRDAGVAS WYDFAVAIAE EAHALGLIAR IPAIVPIATS
DYPTPAKRPS FSVLDVSGTR SLLGDAHVHW RTNLKTMLKE EKALV