Gene Saro_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3235 
Symbol 
ID3917493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3456553 
End bp3457611 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID640446019 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_498504 
Protein GI87201247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAACC TGCTTGTCAC CGGCGGCGCC GGCTTCATCG GCGGCAATTT CGTCCACTAT 
TGGGCGCAGC AGCACCCTGA CGACACGATC GTCGTGCTCG ACTGCCTGAC TTATGCTGGC 
AACCGGTCGA CCATTGCGGG GGTGGAACAG GCCGAACTCG TGGTGGGCGA CATTCGCGAC 
ACCGACCTCG TCGAGAAGCT GCTGCGCGAG CGGGACATCG CGACGCTCGT CCACTTCGCC 
GCAGAAAGCC ATGTCGACCG TTCGATTACC GGACCGGACG CCTTCATCGA AACCAATATC 
CTTGGGACCA ACAGCCTGCT CAAGGCCGCG CGCAAGGTCT GGCTGGACGA AGGTTCGGGC 
CGCGCCCACC GCTTCCACCA CATCTCGACC GACGAAGTAT ACGGGTCGCT CGGTCCCAGC 
GATCCGGCCT TCTCGGAAAC CACGCAGTAC CAGCCGAACT CGCCCTATTC GGCGTCGAAG 
GCCGCATCGG ACCACCTCGT GCGCGCCTAT CACCATACCT ATGGTCTGGA TGTGACGACG 
ACGAACTGTT CGAACAATTA TGGGCCGTAC CATTACCCGG AAAAGCTGAT CCCGCTGTTC 
ATCCTCAACG CGCTGTCGGG CAAGCCGCTG CCGATCTACG GCGACGGCAT GAACGTGCGC 
GACTGGCTTT ACGTCGAGGA CCACTGCCGG GGAATCGAGG CGGCGCTGAA GAACGGCAAG 
GCCGGCGAGA CCTACAACAT CGGTGGCGGC GAGGAACTGC CCAACATGGC GGTTATCGAC 
CGTATCTGCG CGGAAGTGGA TCGGGCATTC GTCGAAGTCG AGGGGCTTGC GGAGCGTTAT 
CCGGATGCGC CCGCCGCCAA GGGCCGGGCG ACCAGCGAAC TCAAGACCTT CGTCGAGGAC 
CGCAAGGGGC ACGATCGCCG ATATGCAATC GACGAGACCA AGGCGCGTGC GGAGCTGGGC 
TATGTGCCGC AGCACGACTT CGAGACAGGC CTTCGCGGCA CCCTGCGCTG GTACTTCGAC 
AACGAAGCGT GGTGGCGGCC GCTCAAGGAT CGCGGCTGA
 
Protein sequence
MSNLLVTGGA GFIGGNFVHY WAQQHPDDTI VVLDCLTYAG NRSTIAGVEQ AELVVGDIRD 
TDLVEKLLRE RDIATLVHFA AESHVDRSIT GPDAFIETNI LGTNSLLKAA RKVWLDEGSG 
RAHRFHHIST DEVYGSLGPS DPAFSETTQY QPNSPYSASK AASDHLVRAY HHTYGLDVTT 
TNCSNNYGPY HYPEKLIPLF ILNALSGKPL PIYGDGMNVR DWLYVEDHCR GIEAALKNGK 
AGETYNIGGG EELPNMAVID RICAEVDRAF VEVEGLAERY PDAPAAKGRA TSELKTFVED 
RKGHDRRYAI DETKARAELG YVPQHDFETG LRGTLRWYFD NEAWWRPLKD RG