| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3234 |
|---|
| Symbol | |
|---|
| ID | 3917492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 3455384 |
|---|
| End bp | 3456517 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640446018 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_498503 |
|---|
| Protein GI | 87201246 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA ACAACCGGAC CGGCGACGTC AAGGCAATCG CCATTCACCT TCCGCAGTTC
CATCCCGTCC CGGAAAACGA CGCCTGGTGG GGCAAGGGCT TCACGGAATG GACCAACGTC
ACCAAGGCCC GACCACTGTT TCCCGGCCAT CCCCAGCCGC ACCTGCCGTC AGACCTTGGC
TTCTACGATA TGCGCTTGCC GGAAACGCGC GCGGCGCAGG CCGAGCTGGC CCGGCAGTAC
GGCATATCGG CCTTCTGCTA TTATCACTAC TGGTTCGGCG GCAAGCGCAT CCTCGAGCGT
CCGGTGAACG ACATCGTCGC CTCGGGAGAG CCCGACTTTC CGTTCTGCCT GTGCTGGGCG
AACGAGAACT GGACAAGAAC CTGGGACGGC AAGGATTCAG CGGTCCTGCT CGCCCAGAAC
TACGGGCCTG ACGACGATCT GGCCCATTTC CGCGAACTTC TGCCGATCTT CTCCGACCCC
AGATACTTGC GCATCGATGG CAAGGTCGCC TTCTTCGTCT ATCGACCCGA CCAGCTTCCC
GATGCCCGAT CGACAGTCGC GATCTGGCGC GAAGAGGCGC GCAAGGCGGG TCTTGGAGAA
CTGTTCCTCG GCGCTTTCAT GACTTCGGCG TTCGACGTCG AGGCTAGCGG CTTCGACGTG
GCCGTGGAAT TTGCTCCAAA CAAGTTCAGC CCGCCGCAGG CTTCGGGATT TCGGCGTCTG
CTGACCCGTG CATGGTGCCG TATCTTCGCT CGCCTGCGCG GTACCCGGCA GGCCGCGATC
CATCTCTACG ACGATCTCGC GCGCGGCATG ACCGAAAGCC CGCCCCCGGC CGGCGTTTCG
CCCGACCGCT GGCTGCGCTG CGTCACGCCC GGCTGGGACA ATTCGGCCCG CAAGAAGAAC
CGCCCGCTGA TCTTCGTCGG CTCCACGCCG GAACGCTACG GGCGGTGGCT GCGCGAAATG
GTGGCGTGGA CACGCCGCAA CGCCCCGCCA GAGCGCCGCT TCATCTTCAT CAATGCCTGG
AACGAATGGG CCGAGGGCAA CCACCTCGAA CCCGACCAGC GCAACGGTCA CGCCAATCTA
GAGGCGACCG CCCGCGCACT CGACGAAGGC AACCGCGACG CGGCGAATGG CTAG
|
|---|
| Protein sequence | MNANNRTGDV KAIAIHLPQF HPVPENDAWW GKGFTEWTNV TKARPLFPGH PQPHLPSDLG
FYDMRLPETR AAQAELARQY GISAFCYYHY WFGGKRILER PVNDIVASGE PDFPFCLCWA
NENWTRTWDG KDSAVLLAQN YGPDDDLAHF RELLPIFSDP RYLRIDGKVA FFVYRPDQLP
DARSTVAIWR EEARKAGLGE LFLGAFMTSA FDVEASGFDV AVEFAPNKFS PPQASGFRRL
LTRAWCRIFA RLRGTRQAAI HLYDDLARGM TESPPPAGVS PDRWLRCVTP GWDNSARKKN
RPLIFVGSTP ERYGRWLREM VAWTRRNAPP ERRFIFINAW NEWAEGNHLE PDQRNGHANL
EATARALDEG NRDAANG
|
|---|
| |