Gene Saro_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3223 
Symbol 
ID3917481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3441276 
End bp3441989 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID640446007 
Productpolysaccharide export protein 
Protein accessionYP_498492 
Protein GI87201235 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0801201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGT TTTTATCCCG GCGAGCCACT ACTTCGGCAA TCGCGATTTC GTTTTCGATC 
GGTCTGGCCG GGTGTGGTTC TCCACCTGTG CGGGTAGGCC TCGTCAATTC AACCCCTGTA
CAAGAGTACG GACAGGGCGA TTATTCGGCC AGCGAGCAGT CCGAGTACTT GCTCCGCCCC
TCCGATGTCA TTGCAATCAC CGTTTTCCGG GAACCGGATC TTTCGGTTGA AAGCATTCCG
GTTGGGGCGG ACGGTACGAT CTCGCTGCCG ATGATCGGCC CGGTCAAGGT CGACGGCCTG
ACCACGCGCG GCGTGGAGGA GCTGGTTGCC AGCAAGCTTT CGTCCGCCGC TCTCGTGAAC
CCCAGCGTCA ACGTCAACGT GTTGCAGTTC GGCTCGCATG TCGTGACGGT CGAGGGTTCC
GTCGAAAAAC CGGGAATGTA CTCGTTCAAG CCCGGAACCC GGCTATCGGG TGCCATGGCC
CTGGCGGGTG GCTCGAGCCG CGTCGCCAAA CTCAGGGAAG TGGCGGTGTT CCGCCAGACC
CCGCGTGGCA TCGCGGTTGC GAAGTTCGAC TATGCTGCGG TCCGTGCAGG CACGATGATG
GATCCGGTGC TGTTCCCCAA CGACAGGGTC GTGGTCGGGA CTTCCGGGCT GTCGCAGTTC
TGGCAGGACC TGCTCAAGAC TCTACCGGCT TTCGCGCTGT TCACGAACAT CTGA
 
Protein sequence
MAKFLSRRAT TSAIAISFSI GLAGCGSPPV RVGLVNSTPV QEYGQGDYSA SEQSEYLLRP 
SDVIAITVFR EPDLSVESIP VGADGTISLP MIGPVKVDGL TTRGVEELVA SKLSSAALVN
PSVNVNVLQF GSHVVTVEGS VEKPGMYSFK PGTRLSGAMA LAGGSSRVAK LREVAVFRQT
PRGIAVAKFD YAAVRAGTMM DPVLFPNDRV VVGTSGLSQF WQDLLKTLPA FALFTNI