Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3223 |
Symbol | |
ID | 3917481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3441276 |
End bp | 3441989 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640446007 |
Product | polysaccharide export protein |
Protein accession | YP_498492 |
Protein GI | 87201235 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0801201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGT TTTTATCCCG GCGAGCCACT ACTTCGGCAA TCGCGATTTC GTTTTCGATC GGTCTGGCCG GGTGTGGTTC TCCACCTGTG CGGGTAGGCC TCGTCAATTC AACCCCTGTA CAAGAGTACG GACAGGGCGA TTATTCGGCC AGCGAGCAGT CCGAGTACTT GCTCCGCCCC TCCGATGTCA TTGCAATCAC CGTTTTCCGG GAACCGGATC TTTCGGTTGA AAGCATTCCG GTTGGGGCGG ACGGTACGAT CTCGCTGCCG ATGATCGGCC CGGTCAAGGT CGACGGCCTG ACCACGCGCG GCGTGGAGGA GCTGGTTGCC AGCAAGCTTT CGTCCGCCGC TCTCGTGAAC CCCAGCGTCA ACGTCAACGT GTTGCAGTTC GGCTCGCATG TCGTGACGGT CGAGGGTTCC GTCGAAAAAC CGGGAATGTA CTCGTTCAAG CCCGGAACCC GGCTATCGGG TGCCATGGCC CTGGCGGGTG GCTCGAGCCG CGTCGCCAAA CTCAGGGAAG TGGCGGTGTT CCGCCAGACC CCGCGTGGCA TCGCGGTTGC GAAGTTCGAC TATGCTGCGG TCCGTGCAGG CACGATGATG GATCCGGTGC TGTTCCCCAA CGACAGGGTC GTGGTCGGGA CTTCCGGGCT GTCGCAGTTC TGGCAGGACC TGCTCAAGAC TCTACCGGCT TTCGCGCTGT TCACGAACAT CTGA
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Protein sequence | MAKFLSRRAT TSAIAISFSI GLAGCGSPPV RVGLVNSTPV QEYGQGDYSA SEQSEYLLRP SDVIAITVFR EPDLSVESIP VGADGTISLP MIGPVKVDGL TTRGVEELVA SKLSSAALVN PSVNVNVLQF GSHVVTVEGS VEKPGMYSFK PGTRLSGAMA LAGGSSRVAK LREVAVFRQT PRGIAVAKFD YAAVRAGTMM DPVLFPNDRV VVGTSGLSQF WQDLLKTLPA FALFTNI
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