Gene Saro_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3197 
Symbol 
ID3917455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3414207 
End bp3415115 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID640445981 
Productband 7 protein 
Protein accessionYP_498466 
Protein GI87201209 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.194642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATT CGAAGACCCA TTCGGCCAGC ACCGAAACCG CAGCCTGGTC GACCAGCGGC 
TATTTCATGC TGATCCTCAT GCTTGTGCTG ATTGGCCTCA CTGCGGCGCG CGTGGTCGGC
TTCGCCGGCG GCAACCCCGG CGAGGACGAG GTGCCGGGCT TCGTCGCGAC GATTGCGGCC
CTGCCAGTCG CGATCGTGTT CATCGCCTCG GGATTCTACA TGATCCAGCC GAACCAGGCA
GCCGCGATCA CCTTGTTCGG CTCCTATCGC GGGACTGACC GGAACCACGG CCTTCGCTGG
GTCTGGCCGT GGATGGCCAA GACCCGGATA TCGGTCCGCG CCAACAACGT CGTCTCCGAA
AAGCTCAAGG TGAACGATCT GCGGGGCAAT CCGATCGAGA TCGCCGCGAA CGTCGTCTGG
CGCGTATCCG ATACGGCGCA GGCCCTGTTC GACGTCGACG ACTACAAGGC CTTCGTCTTC
GTCCAGATCG AAAGCGCGGT CCGCTCCATC GGCTCGCGCT ACCCCTACGA CGACATCGAG
CATCACGAGG TGACGCTGCG GGGCCACCAT GACCAGATCA ACGATGAACT GCGCACGGAA
CTCAACGCGC GGCTGGTCCT GGCGGGGATA ACGGTCGACG AATGCGGCCT CACGCACCTC
GCCTATGCTC CTGAAATCGC CGGGGCCATG CTGCGCCGCC AACAGGCGGA AGCCGTGATC
TCGGCGCGCC GGAAGCTGGT CGAAGGCGCG GTCTCGATGG TCGAGATGGC GCTGACCCAG
CTGTCCGAGA AGAACGTGGT TGAACTCGAC GACGAACGCC GCGCCGCCAT GGTTTCGAAC
CTCATGGTCG TGCTGTGCGG CGAACGCGAC ACGCAGCCCG TCGTCAACAC CGGCACGCTG
TACCAGTAA
 
Protein sequence
MSDSKTHSAS TETAAWSTSG YFMLILMLVL IGLTAARVVG FAGGNPGEDE VPGFVATIAA 
LPVAIVFIAS GFYMIQPNQA AAITLFGSYR GTDRNHGLRW VWPWMAKTRI SVRANNVVSE
KLKVNDLRGN PIEIAANVVW RVSDTAQALF DVDDYKAFVF VQIESAVRSI GSRYPYDDIE
HHEVTLRGHH DQINDELRTE LNARLVLAGI TVDECGLTHL AYAPEIAGAM LRRQQAEAVI
SARRKLVEGA VSMVEMALTQ LSEKNVVELD DERRAAMVSN LMVVLCGERD TQPVVNTGTL
YQ