Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3173 |
Symbol | |
ID | 3918215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3388263 |
End bp | 3388955 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640445957 |
Product | OmpA/MotB |
Protein accession | YP_498442 |
Protein GI | 87201185 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC GTCGCGTACT TATGTCGAGC CTGTGTGCTG TTTCGCTGGT CAGTCTGTCG GCTTGCGTCA CCGATCCCAA CACCGGCGAA AAGAAGGTTT CGCGTACCGC CATCGGCGGT ATCGGCGGCG CGCTTGGCGG CGCACTGCTC GGCGGTCTCA TCGGCGGCAA GACGGGCCGC ATCGTCGGTG CCGGCATCGG CGGCGTGGCC GGCGGCGTGA TCGGCTACCA GAAGGACAAG CAGATCCGCG AACTGCGCGA ACAGACCGCC GGCACCGGGG TTGACGTGAC CGAGACCGAC AACGGCCAGG CCATCCTTGT CAACCTGCCC AACGGCGTCA CCTTCGACGT CGACAGCTCC ACCGTGAAGC CCGCCTTCGC CACCACGCTC GACCGCGTCG CGCAGTCGCT GGTGCAGTAC CCGAACTCGC TGATCGACGT TTATGGCCAC ACCGATTCCA CCGGCTCGGA CGCCTACAAC CAGGCGCTTT CGGAACGCCG CGCGCGCGCC GTCGCCGACT ACCTGATTTC GCGCGGGGTC GGTTATGCGC GCATCCGTAG CCAGGGCTTC GGTGAATCGC AGCCGATCGC GTCGAACGAC ACCGAGCAGG GGCGTCAGGC CAACCGCCGC GTCGAGATCA AGATCGTCCC CATCAGCCAG GATGACGTGA ACGCCGCCCG CAGCGGTCAG TAA
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Protein sequence | MKIRRVLMSS LCAVSLVSLS ACVTDPNTGE KKVSRTAIGG IGGALGGALL GGLIGGKTGR IVGAGIGGVA GGVIGYQKDK QIRELREQTA GTGVDVTETD NGQAILVNLP NGVTFDVDSS TVKPAFATTL DRVAQSLVQY PNSLIDVYGH TDSTGSDAYN QALSERRARA VADYLISRGV GYARIRSQGF GESQPIASND TEQGRQANRR VEIKIVPISQ DDVNAARSGQ
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