Gene Saro_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3173 
Symbol 
ID3918215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3388263 
End bp3388955 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID640445957 
ProductOmpA/MotB 
Protein accessionYP_498442 
Protein GI87201185 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC GTCGCGTACT TATGTCGAGC CTGTGTGCTG TTTCGCTGGT CAGTCTGTCG 
GCTTGCGTCA CCGATCCCAA CACCGGCGAA AAGAAGGTTT CGCGTACCGC CATCGGCGGT
ATCGGCGGCG CGCTTGGCGG CGCACTGCTC GGCGGTCTCA TCGGCGGCAA GACGGGCCGC
ATCGTCGGTG CCGGCATCGG CGGCGTGGCC GGCGGCGTGA TCGGCTACCA GAAGGACAAG
CAGATCCGCG AACTGCGCGA ACAGACCGCC GGCACCGGGG TTGACGTGAC CGAGACCGAC
AACGGCCAGG CCATCCTTGT CAACCTGCCC AACGGCGTCA CCTTCGACGT CGACAGCTCC
ACCGTGAAGC CCGCCTTCGC CACCACGCTC GACCGCGTCG CGCAGTCGCT GGTGCAGTAC
CCGAACTCGC TGATCGACGT TTATGGCCAC ACCGATTCCA CCGGCTCGGA CGCCTACAAC
CAGGCGCTTT CGGAACGCCG CGCGCGCGCC GTCGCCGACT ACCTGATTTC GCGCGGGGTC
GGTTATGCGC GCATCCGTAG CCAGGGCTTC GGTGAATCGC AGCCGATCGC GTCGAACGAC
ACCGAGCAGG GGCGTCAGGC CAACCGCCGC GTCGAGATCA AGATCGTCCC CATCAGCCAG
GATGACGTGA ACGCCGCCCG CAGCGGTCAG TAA
 
Protein sequence
MKIRRVLMSS LCAVSLVSLS ACVTDPNTGE KKVSRTAIGG IGGALGGALL GGLIGGKTGR 
IVGAGIGGVA GGVIGYQKDK QIRELREQTA GTGVDVTETD NGQAILVNLP NGVTFDVDSS
TVKPAFATTL DRVAQSLVQY PNSLIDVYGH TDSTGSDAYN QALSERRARA VADYLISRGV
GYARIRSQGF GESQPIASND TEQGRQANRR VEIKIVPISQ DDVNAARSGQ