| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3164 |
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| Symbol | |
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| ID | 3918206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3378071 |
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| End bp | 3379762 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445948 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_498433 |
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| Protein GI | 87201176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.115784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGACG CAATCGTAAT CGGATCGGGA ATGAGCGGCG GCATCGCCGC CAAGGAACTG
TGCGAACGCG GCCTCAAGAC GCTCGTGATC GAGCGTGGCC GCAAGCTCGA GCACGGCGCG
TCCTATACTG ACTGGATGAA CCCCTGGGAC GTCCCCAACG CTGGCCTCAT TCCCGAAGAG
GAACTGGCCC GCGACTATGC CGTCCAGCGC AACTGCTATG CCGTGAACAC CGCTACGCAG
CAGTATTGGG TCAAGGATAG CGAGCATCCC TACACCACGC CGGAAGACAA GCCCTTCTGG
TGGATTCGCG GCTATCACCT GGGCGGCCGT TCGATCATGT GGGGTCGCCA GACCTATCGC
ATGTCGGAAA TGGACTTCGA GGCCAATGCG CGCGACGGGC ACGGCTCGGA CTGGCCGATC
CGCTATGCCG ATCTCGCGCC GTGGTACGAT CATATCGAGC GGTTCATCGG CGTTTCCGGA
TCGAAGGAGG GATTGCCGCA GCTTCCGGAC GGCGAATTCC TGCCCGCCAT GCCGATGAAC
GACGGCGAAA AGGCGTTCAA GTCGGCGGTG GAGCGCAACT ATCCCGATCG CAAGGTCATC
ATCGGCCGCT GTGCGCACCT GACCGAAGCG CGCGAGCATC ACACGGAACT GGGGCGCAAC
CCCTGCCAGT ACCGCTCGCT CTGCGAACGA GGTTGTTCCT ACGGGGCTTA TCACTCCAGC
CTGTCTTCGT CGCTCCCCGC GGCGGAAGCG ACCGGCAACC TTACCATCGT GACCGACGCC
ATCGCCCATT CGATCATCAC CGATCCCCGG ACGGGCAAGG CCACCGGCGT GCGGGTGATC
GACCAGAACA CCCGCGAAGG CCGGACCTAT GAGGCCAAGG TTGTGTTCCT GTGCGCCTCG
ACCATTCCCA CCGCGCAGAT CCTGCTCAAT TCGCGCAGCG AGGCGAACCC GCGCGGCCTT
GCCAATTCGT CGGACATGGT CGGACGCAAC CTGATGGATC ACCTCTACGG CCTCGGGTAC
GCGGCGCGCA TGCCGGGGCC GGAGACGACC TTTCGCGGGC GGCGCCCCAA CGGTCTCTAC
ATCCCGCGCT ATCGCAACCT GCCAGGCGCC GGCGACACTG CCGGCTTCCT GCGGGGCTAC
GGCTTCCAGG GTGCGGTTGA CCGTAGTCCG TGGCGGGCGG TTGCGAATGC CGCGCCGGGC
GTCGGTGCGG AACTCAAGGA GCGGGTCCGC CACCCCGGCG AATGGATGAC CTACTTCTCC
GGCTTCGGCG AAATGCTGCC GAACCCGGAG AACCGGGTGA CGCTCCATGC GACCAATGTC
GACAAGTGGG GCATGCCCAT CGCCCATATC GACTGCGCGC ACGGCGAGAA CGACCGCAAG
ATGGCGCAGG CGATCCTTGC CGACGGCAAG GCGATGATCG AGGCGGCGGG CGGCCAGATC
GTCATGGCCC GCACGGACCT CGTGCCGCCC GGCCTCGGCA TCCACGAAAT GGGCACCGCC
TGCATGGGCA AGGACCCGAA GACCTCGGTG CTCAACAAGT ACAACCAGGC CCATGACGTG
CCGAACCTGT TCGTCACAGA CGGCGCGGCA ATGGCGTCGG GCGGCTGCCA GAACCCGTCG
CTGACCTACA TGGCGCTTTC CGCCCGCGCG GCGCACCATG CCACGGAGTT CCTCAAGGCC
GGGACGATCT GA
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| Protein sequence | MFDAIVIGSG MSGGIAAKEL CERGLKTLVI ERGRKLEHGA SYTDWMNPWD VPNAGLIPEE
ELARDYAVQR NCYAVNTATQ QYWVKDSEHP YTTPEDKPFW WIRGYHLGGR SIMWGRQTYR
MSEMDFEANA RDGHGSDWPI RYADLAPWYD HIERFIGVSG SKEGLPQLPD GEFLPAMPMN
DGEKAFKSAV ERNYPDRKVI IGRCAHLTEA REHHTELGRN PCQYRSLCER GCSYGAYHSS
LSSSLPAAEA TGNLTIVTDA IAHSIITDPR TGKATGVRVI DQNTREGRTY EAKVVFLCAS
TIPTAQILLN SRSEANPRGL ANSSDMVGRN LMDHLYGLGY AARMPGPETT FRGRRPNGLY
IPRYRNLPGA GDTAGFLRGY GFQGAVDRSP WRAVANAAPG VGAELKERVR HPGEWMTYFS
GFGEMLPNPE NRVTLHATNV DKWGMPIAHI DCAHGENDRK MAQAILADGK AMIEAAGGQI
VMARTDLVPP GLGIHEMGTA CMGKDPKTSV LNKYNQAHDV PNLFVTDGAA MASGGCQNPS
LTYMALSARA AHHATEFLKA GTI
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