Gene Saro_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3160 
Symbol 
ID3918202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3372723 
End bp3373298 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID640445944 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_498429 
Protein GI87201172 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGCT TGAAAACGAT GATCGCCGGG GCCGCCATCG GCCTCTCCTC GCTCGCGCTG 
GCAGCATGCG ACAAGGCCGA CGGTGGTCCG ACCGGCGCTG CCAACGAAGC CAGCGCGGAG 
GGCAGTGGCA GCCTCTACGA CGCACTTGGC GATGCGAACG ACCTGTCCTC GACGGCGAGG 
CTGGTGAAGG CGGCAGGATT GGAAAAGATG TTCGAGGGAC AGGGCAGCTA CACCCTGTTC 
GCGCCGACCG ACGATGCCAT CGCTGCGCTT CCTGAAGCCG ACCGCAAGGC GCTGGAAAGC 
GCCGAGGGCC GCGCCCAGCT TGTCGCGCTG CTGAGCCAGC ACATCACGCC GGGCTATGTC 
GGCAGGACCG ACCTCGACCA GGGGCTGGAA CGGGGCAAGG GCAAGGTTCA GCTGGCCAGC 
GTCGGCTCCG CGCCGATCGT CTTGCGCAAG GATGGCTGCG TGCTCGTGCT TGGCGAAGGC 
GCGGATGCCC CCAAGGTGGT GGGCGAGCCA ATCGCGTCGC GGAACGGGAT GATCTACCGG 
ATAGACAAGG TACTGCCGGC GCCCGCGGCA AAGTGA
 
Protein sequence
MRRLKTMIAG AAIGLSSLAL AACDKADGGP TGAANEASAE GSGSLYDALG DANDLSSTAR 
LVKAAGLEKM FEGQGSYTLF APTDDAIAAL PEADRKALES AEGRAQLVAL LSQHITPGYV 
GRTDLDQGLE RGKGKVQLAS VGSAPIVLRK DGCVLVLGEG ADAPKVVGEP IASRNGMIYR 
IDKVLPAPAA K