Gene Saro_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3157 
Symbol 
ID3918199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3369948 
End bp3370664 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID640445941 
Productpeptidase M23B 
Protein accessionYP_498426 
Protein GI87201169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTCA ACATCAAAAC CTTCAAGACT GCTCTCGGTG CCTTTGCCGC CGTTGCTCTC 
TTTTCCTCTG CCGCGCCGGC TCTTGCCAAC AGCGCCGCTT CCGCCGACAT CGCCGCCCCG
CTTCGCGCCG CCGAAGCTGC CAAGGCAGGC GTCTCGGCCG ACCGTGGCGA CGAGGAATTC
CGTCGTCTCT TCGCCAACTG GCAGTCGCTC GACAACGGCA TCCTGCCTTC GGCCAAGCCG
ACCACGATCC GCCGCGCTTC GGTGTCGATC CCGTCGCTTG CCCCGGTTGC GATGACCCGC
CTTTCCAGCA GCTACGGCAT GCGCGAACAC CCCGTGCTCG GCGGTCGCCG CGCACACAAG
GGCATCGACC TTGCCGCCCC CACCGGCACC CCGATCCGCG CCAGCGCCGA CGGCATCGTC
GAGAAGGCCG AATGGTTCGG TGGCTACGGC CTGTTCGTGC AACTCGACCA TGGCGGCGCG
ATGGAAACCC GCTACGGCCA CATGTCGCGC GTTGCCGTTG CCGAAGGCCA GCAGGTCCGC
AAGGGCGACG TGATCGGCTA TGTCGGTTCG ACCGGCCGCT CGACCGGCCC GCACCTGCAT
TATGAAGTCC GCGTGTCGGG CGAAGCCGTC AACCCGGTGC CCTACATGCA GGGGAGCACC
AAGCTCTACG CAAGCAACAA CTCGGCCGAA GGACGCGGCG GTCCGGAAGA AGAATAA
 
Protein sequence
MLFNIKTFKT ALGAFAAVAL FSSAAPALAN SAASADIAAP LRAAEAAKAG VSADRGDEEF 
RRLFANWQSL DNGILPSAKP TTIRRASVSI PSLAPVAMTR LSSSYGMREH PVLGGRRAHK
GIDLAAPTGT PIRASADGIV EKAEWFGGYG LFVQLDHGGA METRYGHMSR VAVAEGQQVR
KGDVIGYVGS TGRSTGPHLH YEVRVSGEAV NPVPYMQGST KLYASNNSAE GRGGPEEE