Gene Saro_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3148 
Symbol 
ID3918190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3359153 
End bp3360457 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content67% 
IMG OID640445932 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_498417 
Protein GI87201160 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.442778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGTG ATGTGAAGCC GGACGTCTGT GTCGTCGGCC TTGGCTATAT CGGACTTCCC 
ACCGCCGCCA TCATTGCCCG CGCCGGCTGC CGCGTGCTGG GCCTCGACGT TTCGCAGAAG
GTGGTCGACA CGATCAACCG GGGCGAGATT CACATCGAGG AAGTGGACCT CGACGGTCTT
GTCCATGGCG TCGTCCAGCG CGGGCTGCTG CGCGCCTCGA CCGAGATTGC GCCCGCCGAC
GTCTTCGTGA TCGCGGTGCC GACGCCTTTC GAGAAGGACG GCCACCACAC GCCCGACATT
TCCTATGTGC TGGCCGCTGC GACGCAGGTG GCCGCCGTGC TCAAGGCGGG CGACACGGTG
ATCCTCGAAT CGACCTCGCC GGTCGGCACG ACCGAACAGA TGCGCGACCT GATGGCGGGG
CTGCGGCCGG ACCTGAAGTT TCCGGGCAAG ACGCGCGAGA CGCCCGACGT TTCGATCGCC
TATTGCCCCG AGCGCGTGCT GCCGGGGCGC ATCCTGGAAG AGCTGACCAA CAACGACCGT
TCCATCGGCG GCATCACGCC GCGCTGCGCA CGCAAGGCAC TGGCATTCTA CAAGCGCTTC
GTGCGCGGAA CCTGCGTGAC CACCGATGCC CGCTCTGCCG AAATGACCAA GCTGGTCGAG
AACGCCTATC GCGACGTCAA CATCGCCTTC GCAAACGAGC TTTCGATGGT CGCGGACCGC
ATGGGGCTAG ACGTGTGGGA GGTCATCCGT CTTGCCAACC GCCACCCGCG CGTGAACATC
CTCCAGCCAG GGCCGGGCGT GGGCGGGCAT TGCATCGCGG TGGACCCGTG GTTCATCGTC
GCCGGCGCAC CCGACGAGAC GCCGCTTATC CGCACCGCGC GCAACGTCAA CGACGGCAAG
ATGCATCACG TGGTGAAGAA GGCGACGGAA CTGGTCGAAG CTCACCCCGG CGAAAAGGTC
GCGTGCCTCG GCCTCGCGTT CAAGGCGAAC ATCGACGACT TCCGCGAGAG CCCGGCGCGC
TATGTCGCGG CGAGCCTAGC CCGGCGCTTC GGCAGCCGCG TCCACATCGT CGAGCCCTAT
GCCGGCACCC TGCCGCGCGA ATTCGAGGGC ACCGGCGCGG TGCAGATCGA CGTCGACACG
GCGCTGGAGG ATTGCGGCGT GCTGATCGTG CTGGTCGACC ACGACGTGTT CAAGGTGATC
CCGCTCGCCG AGCGCGCGGG CAAGGTGGTC TACGACACGC GCGGCATCTG GCCGGACCAG
CCGGGCGCCG AAAGCGCTGG CGCGGGTTTG CGGCTGGCGA GCTAG
 
Protein sequence
MMGDVKPDVC VVGLGYIGLP TAAIIARAGC RVLGLDVSQK VVDTINRGEI HIEEVDLDGL 
VHGVVQRGLL RASTEIAPAD VFVIAVPTPF EKDGHHTPDI SYVLAAATQV AAVLKAGDTV
ILESTSPVGT TEQMRDLMAG LRPDLKFPGK TRETPDVSIA YCPERVLPGR ILEELTNNDR
SIGGITPRCA RKALAFYKRF VRGTCVTTDA RSAEMTKLVE NAYRDVNIAF ANELSMVADR
MGLDVWEVIR LANRHPRVNI LQPGPGVGGH CIAVDPWFIV AGAPDETPLI RTARNVNDGK
MHHVVKKATE LVEAHPGEKV ACLGLAFKAN IDDFRESPAR YVAASLARRF GSRVHIVEPY
AGTLPREFEG TGAVQIDVDT ALEDCGVLIV LVDHDVFKVI PLAERAGKVV YDTRGIWPDQ
PGAESAGAGL RLAS