| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3147 |
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| Symbol | |
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| ID | 3918189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 3356399 |
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| End bp | 3358726 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640445931 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_498416 |
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| Protein GI | 87201159 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.774521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTA TGTCCACGCG CGCCGTTCTG GCCGCATCTG CCGCGCTGTT CGCGCTGCCT
GCCGTCCCCG CCATTGCGCA GGAAGCACCG GCTGACGAAA CCACCGCCTC GAACGAGATC
ACCGTCATCG CCCGCCGCCG CGAGGAGCGC CTGCTCGACG TGCCGATCGC GATCTCCGCG
CTCAGCACCG AAGCGCTCGA CAAGGCCGGC GCCAAGGATC TCTCCGGCGT CCAGGGCGCG
ATCCCCAACG TCAACATCGT GCAGGGCCGC GGCTCGGCCA GCAGCGCCAA CTTCTACATC
CGCGGCATCG GCCAGCCGGA CGCGCTGCAG ACCTTCGACC CGGCTGTCGG CGTCTATGTC
GACGGCGTTT ACCTCAGCCG CATCCAGGGT GCGCTGCTCA ACCTGTTTGA CGTCCAGCGC
GTCGAAGTCC TGCGCGGGCC GCAGGGCACG CTCTATGGCA AGAACACCAT CGGCGGCGCG
GTCAACGTCG TCTCGAAGAA GCCCGACCTC AACGACTTGC GCGGCGAAGC GTCGATCACC
TACGGCCGCT TCGACGAAGT GACCGCCAAG GGCTACGTCT CGGCCCCGCT TGTCGCGGAC
AAGCTCGCCC TCTCGGTCGC GGGGGTCTAC GACGACCGCG ACGGCATCGT CACCGATCCC
GCCACCGGCC GGAAGTACAA CGACCGCAAC AACCTCTCGG GCCGCGCAAT CCTTCGCGCC
CAGCCGACCG ACACCGTCGA GGTCCTGATC TCGGGCGATT ACACCCGCCA GCGCAACTCG
CTGACCATGG GCCAGGCGAC CGCCCCGCTG ATCGGGTTCG ACTACAACGC CGACTTCAGC
GCCGTCACGC CCTTCGTGAT CGCGCCCGCC GCCACCGGCG AATGGGACTA CAAGGCCTCC
AGCAGCTTTG CCGGCGACAA GGGCCAGAAG CTCGACCACT GGGGCGTTTC GGGCACGATC
AACGTCGACC TGTCCGATAC CCTGCAACTC GTCTCGATCA GCGCCTACCG CAAGCTCAAG
ACCGACTTCT TCGTCGACAT CGACGCAACC ACCGCCGAAG TGGGCGACGT CTTCGTCGGC
ACCCGCCAGC ACCAGTTCAG CCAGGAACTC CAGCTCAAGC TCGATGCCGA CAAGCTCAAG
GGCGTGCTCG GAGTCTACTA CCTGAACGAG CACGTGACCT CGCACCAGGA AGCCTATGCC
GACAGCTACC TGCGCTATGT CGGCACGCCG CTCAACTTCC TGCGCACCAT CGATGACGAG
CAGGACACCA AGTCCTACGC CGCCTTCGGC CAGCTTACCT ACGACTTCAC CGATGCGGTC
TCGCTGACCG GCGGCCTGCG CTACACGCGC GAGACGAAGG AATACTTCCG CACCACCACG
GCCACCACGT CGAGCCCGAT CTTCCCGGCC CTGGTCATCA AGGGCACCTT CACCTTCCCG
ACCAACCTGC CCGCCCCCTA CAACACGCTC GACAGCGTGA CCTACGAGGC GTGGACCCCC
TCGGCGACGC TCAGCTACAA GCCCTCGCGC AACACGATGC TCTACGGCTC GGTCAGCCGC
GGCTTCAAGT CGGGCGGCTT CAACGGGCGC GTCAACGGGC TCGGCGACGT CACCCAGGTG
GTCGACGGCA CGACCGTCGT CGTACCGACC TTCAAGCCTG AAACCGTGTG GACCTACGAA
GTCGGCGCCA AGGGCTCGTT CCTCGACGGG CGCGTGAACA TCTCGGGCGC GGCGTTCTAT
TCCGACTACG CGAACTTCCA GGCGCGCGTC GGCGGCGGCA ACACCGGCAT CAACGGCGGC
AGCTTCCCCG TGCTCAACGC CGGCAAGCTG CGCATCCAGG GCTTCGAGTT CGACGTCAAC
GTGCGGCCCG CCGATCCGGT CACGCTGTTC GCCTCGGTCG GCTATCTCGA TGCCGACTAC
AAGGAGTTCA ACGACGGCCG CCGGGCGCCC GCGTTCTCGT GCAACCCGAC TGGCGCGAAG
GTGACCTGCA AGCCCGCCTT CGCCCCGCCG CTTACCCTTC GCGCGGGCGG CGAATACCGC
GTGCCGCTGG GCGATGCGAC GCTGAGCCTG GGCGGCGACG TCCGCTTCGT CGACAAGCAT
TACCTGTCGG TCGACAACCG CCCCGGCCTC ACCGAAGACG GCTACCTGAT CGGCAACCTC
TATGCCCAGG TGGACTTCGA CAAGTTCTAC CTGCGCGGCG CGGTCCGGAA CGTAGGCAAC
ACGCTCTACA AGACCGACGG GCAGGAATTC AGCTCGGTCG GCAACATCCA GACCGTCTAC
TATGGCGACC CGCGCACGTG GAACGTCACG CTCGGCGTCC GCTTCTGA
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| Protein sequence | MTRMSTRAVL AASAALFALP AVPAIAQEAP ADETTASNEI TVIARRREER LLDVPIAISA
LSTEALDKAG AKDLSGVQGA IPNVNIVQGR GSASSANFYI RGIGQPDALQ TFDPAVGVYV
DGVYLSRIQG ALLNLFDVQR VEVLRGPQGT LYGKNTIGGA VNVVSKKPDL NDLRGEASIT
YGRFDEVTAK GYVSAPLVAD KLALSVAGVY DDRDGIVTDP ATGRKYNDRN NLSGRAILRA
QPTDTVEVLI SGDYTRQRNS LTMGQATAPL IGFDYNADFS AVTPFVIAPA ATGEWDYKAS
SSFAGDKGQK LDHWGVSGTI NVDLSDTLQL VSISAYRKLK TDFFVDIDAT TAEVGDVFVG
TRQHQFSQEL QLKLDADKLK GVLGVYYLNE HVTSHQEAYA DSYLRYVGTP LNFLRTIDDE
QDTKSYAAFG QLTYDFTDAV SLTGGLRYTR ETKEYFRTTT ATTSSPIFPA LVIKGTFTFP
TNLPAPYNTL DSVTYEAWTP SATLSYKPSR NTMLYGSVSR GFKSGGFNGR VNGLGDVTQV
VDGTTVVVPT FKPETVWTYE VGAKGSFLDG RVNISGAAFY SDYANFQARV GGGNTGINGG
SFPVLNAGKL RIQGFEFDVN VRPADPVTLF ASVGYLDADY KEFNDGRRAP AFSCNPTGAK
VTCKPAFAPP LTLRAGGEYR VPLGDATLSL GGDVRFVDKH YLSVDNRPGL TEDGYLIGNL
YAQVDFDKFY LRGAVRNVGN TLYKTDGQEF SSVGNIQTVY YGDPRTWNVT LGVRF
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