Gene Saro_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3145 
Symbol 
ID3918187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3354700 
End bp3355593 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID640445929 
Producthypothetical protein 
Protein accessionYP_498414 
Protein GI87201157 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.168968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGT TCGATGTCGT GACCTGGGCC GTGCCCTTCT TCGTGGTCAT GGTCCTGGCC 
GAAATGATCT GGGCCGCGCG CCGCCACCCC GAAAAGTACG AACCGCGCGA CACGCTCACC
AGCCTCGCGC TTGGTCTTGG CAGCACCATC GCGGGTGCAC TGACCGCCGG CGCGGTCTTC
GCCGCCGCGC TGTGGCTGTA CGACCACCGC GTGGCGACCG TTCCCTTCGC ATGGTGGGCC
TGGGCGCTGT GCTTCGTGCT CGACGATTTC AACTACTACC TTGCCCATCG CACCGGCCAC
CGCGTGCGAT GGTTCTGGGC AAGCCACGTC AACCACCACT CCAGCCAGCA TTACAACCTG
TCGACCGCCT TGCGGCAGAC CTGGACCGGC TTCTTCGCAC TGTCGTTCGT CTTCCGCATC
TGGCCCGCTC TGATCGGCTT CCACCCGGCC ATGATCGTGA CGGTGGGCGG CGTGAATCTG
GTCTACCAGT TCTGGATCCA TACCGAAGCG GTCGGGCGCT TGCCGCGCTG GTTCGAGGCG
GTGTTCAACA CCCCGTCGCA CCACCGCGTC CACCACGCCA CAAATCCGCT CTATCTCGAC
CGCAACTATG CCGGCGTGTT CATCGTCTGG GACCGCCTTT TCGGCACCTT CCAGCCCGAG
CGCGACGATC TGGCGATCCG CTATGGCATC GTCCGCCAGC TCGGCAGCTT CCACCTGCTC
CACGCCGCCT TCCACGAATG GCGTGCAATG CTCGGCGACT TCTGGCGCGC GCCGCTGCGC
TACAAGCTGC ACTATCTCGT GCGCGCGCCC GGCTGGAGCC ACGACGGCAG CCGCGAAGGC
TCCGACGCCA TCCGCGCGCG CTGGACCGAA CGGCAGGGCC TCAGCGGCGA TTGA
 
Protein sequence
MKPFDVVTWA VPFFVVMVLA EMIWAARRHP EKYEPRDTLT SLALGLGSTI AGALTAGAVF 
AAALWLYDHR VATVPFAWWA WALCFVLDDF NYYLAHRTGH RVRWFWASHV NHHSSQHYNL
STALRQTWTG FFALSFVFRI WPALIGFHPA MIVTVGGVNL VYQFWIHTEA VGRLPRWFEA
VFNTPSHHRV HHATNPLYLD RNYAGVFIVW DRLFGTFQPE RDDLAIRYGI VRQLGSFHLL
HAAFHEWRAM LGDFWRAPLR YKLHYLVRAP GWSHDGSREG SDAIRARWTE RQGLSGD