Gene Saro_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3119 
Symbol 
ID3918161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3332560 
End bp3333729 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID640445903 
ProductPhage portal protein, HK97 
Protein accessionYP_498388 
Protein GI87201131 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCT TTCAAACGCT TGCCGCCGCC TTCAAGGGCG AGGCGGTGAC GCCGCGTGCG 
CCGCTTGGAC GCACCTTCGT ATCGCCCTGG ATCGCGGCTT CGGACTGGCG GGGCGAGACC
TCGCGCGGGC CGATCAACTA TCCGGTGGCA GTGCGCGAAG CCTATCTCAG GAACCCGGTG
GCGCAGCGCG CGGTGCGGCT GGTTGCGGAA GGCATCGGCG GCGCACCGAT CATCGCATCG
GCCGCGGAGC TGCGGGCCCT GGTCGGCGAG ACGAGCGCGG GGCAACCCCT GCTGGAGACG
CTGGCTGCGC ACCTGCTGTT GCACGGCAAC GGTTACGTCC AGATTCTGCG CGACGCGGAC
GGGGTGCCGG TGGAACTGTT CGCGCTGCGG CCGGAGCGCG TAACGGTGCT GCCGGACGCG
AGCGGATGGC CGGCGGCCTT CGCCTATCGC GTGGGCGAGC GGACGATGCG GATCGAGGCG
GTGGACGACC TTGACCAGCC GAACCTGATC CACGTGCGCC ACTTCCACCC GCTGGACGAC
CACTATGGCG CGGGCTGCCT GGAGGCCGCC GAGGAAGCGG TCGCGATCCA CAACGCGGCA
GCGCGGTGGA ACCGGTCGCT GCTGGAAAAC GCCGCGCGTC CTTCGGGTGC ACTCGTCTAT
GACCCCGGCG ATCCGGGAGC GGCGCTTTCG GCCGATCAGT TCGAACGGAT CAAGGCCGAG
CTGACTGCCG CCTATTCGGG CACCGGCAAT GCCGGACGCC CGATGCTGCT GGAAGGCGGC
CTGAGGTGGC AGGCGCTGGC GCTGACGCCG GCGGACATGG ACTTTGCGAC GCTGAAGGCC
GCGGCGGCGC GCGACATCGC GCTGGCCTTT GGCGTGCCGC CAATGCTGCT CGGCATTCCG
GGCGACAACA CTTATGCAAA TTACCGCGAG GCCAATCGCG CACTGTGGCG ACTGACGCTG
TTGCCGGTTG CGGGCAAGAT CCTTGCCGCG CTGGCTGAAG GGCTGCGATC GTCCTTCGCG
GAGGCGAGCC TGGCCGTGGA CATGGACGGC ATTCCGGCCC TGGCCGAGGA TCGCGAGAGA
CTGTGGTCGC AGGTGAGCGG CGCGGATTTC CTTTCCGCCG ACGAAAAGCG GGCAATGCTT
GGCCTTGACC GGAACGGGGT GGCGGCATGA
 
Protein sequence
MSFFQTLAAA FKGEAVTPRA PLGRTFVSPW IAASDWRGET SRGPINYPVA VREAYLRNPV 
AQRAVRLVAE GIGGAPIIAS AAELRALVGE TSAGQPLLET LAAHLLLHGN GYVQILRDAD
GVPVELFALR PERVTVLPDA SGWPAAFAYR VGERTMRIEA VDDLDQPNLI HVRHFHPLDD
HYGAGCLEAA EEAVAIHNAA ARWNRSLLEN AARPSGALVY DPGDPGAALS ADQFERIKAE
LTAAYSGTGN AGRPMLLEGG LRWQALALTP ADMDFATLKA AAARDIALAF GVPPMLLGIP
GDNTYANYRE ANRALWRLTL LPVAGKILAA LAEGLRSSFA EASLAVDMDG IPALAEDRER
LWSQVSGADF LSADEKRAML GLDRNGVAA