Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3113 |
Symbol | |
ID | 3918155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3327559 |
End bp | 3328107 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640445897 |
Product | ribosomal large subunit pseudouridine synthase E |
Protein accession | YP_498382 |
Protein GI | 87201125 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTCA TCCTGTTCAA CAAGCCCTAT GGCGTGCTCT GCCAGTTCAC CGACGAACGC ACCGGTCCGC CCCGGCCGAC GCTTGCGGAC CATATCCACC GTCCCGGCGT CTATCCGGCC GGCCGCCTCG ACCATGACAG CGAGGGTCTC CTCCTCCTCA CCGACGATGG CCGCCTCCAG GCCCGTATCG CGGACCCGCG CCACAAGATG CCCAAGACCT ACCTCGCGCA GGTCGAAGGC GTACCCGACG AAGCCGCGCT TGCTTCCTTG CGCAAGGGCG TGCGCCTCAA GGACGGCATG ACGCTTCCGG CCGAAGCCGC GCTGATCGAA GATCCGGCGC TTTGGCCGCG CGATCCGCCG ATCCGCGTGC GCAAGACCGT GCCCGACAGT TGGCTGCGCC TGACCATCCG CGAAGGCCGC AACCGCCAGG TCCGGCGCAT GACCGCCGCC GTGGGCCATC CCACGCTGCG CTTGGTCCGC TGGCAGGTCG GCGACTGGTC GCTCGATGGC TTGCGGCCTG GCGAATGGCG CGAAGTCGAG GTCCGCTGA
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Protein sequence | MALILFNKPY GVLCQFTDER TGPPRPTLAD HIHRPGVYPA GRLDHDSEGL LLLTDDGRLQ ARIADPRHKM PKTYLAQVEG VPDEAALASL RKGVRLKDGM TLPAEAALIE DPALWPRDPP IRVRKTVPDS WLRLTIREGR NRQVRRMTAA VGHPTLRLVR WQVGDWSLDG LRPGEWREVE VR
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