Gene Saro_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3113 
Symbol 
ID3918155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3327559 
End bp3328107 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID640445897 
Productribosomal large subunit pseudouridine synthase E 
Protein accessionYP_498382 
Protein GI87201125 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTCA TCCTGTTCAA CAAGCCCTAT GGCGTGCTCT GCCAGTTCAC CGACGAACGC 
ACCGGTCCGC CCCGGCCGAC GCTTGCGGAC CATATCCACC GTCCCGGCGT CTATCCGGCC
GGCCGCCTCG ACCATGACAG CGAGGGTCTC CTCCTCCTCA CCGACGATGG CCGCCTCCAG
GCCCGTATCG CGGACCCGCG CCACAAGATG CCCAAGACCT ACCTCGCGCA GGTCGAAGGC
GTACCCGACG AAGCCGCGCT TGCTTCCTTG CGCAAGGGCG TGCGCCTCAA GGACGGCATG
ACGCTTCCGG CCGAAGCCGC GCTGATCGAA GATCCGGCGC TTTGGCCGCG CGATCCGCCG
ATCCGCGTGC GCAAGACCGT GCCCGACAGT TGGCTGCGCC TGACCATCCG CGAAGGCCGC
AACCGCCAGG TCCGGCGCAT GACCGCCGCC GTGGGCCATC CCACGCTGCG CTTGGTCCGC
TGGCAGGTCG GCGACTGGTC GCTCGATGGC TTGCGGCCTG GCGAATGGCG CGAAGTCGAG
GTCCGCTGA
 
Protein sequence
MALILFNKPY GVLCQFTDER TGPPRPTLAD HIHRPGVYPA GRLDHDSEGL LLLTDDGRLQ 
ARIADPRHKM PKTYLAQVEG VPDEAALASL RKGVRLKDGM TLPAEAALIE DPALWPRDPP
IRVRKTVPDS WLRLTIREGR NRQVRRMTAA VGHPTLRLVR WQVGDWSLDG LRPGEWREVE
VR