| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3084 |
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| Symbol | |
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| ID | 3916699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3302873 |
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| End bp | 3305065 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445867 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_498353 |
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| Protein GI | 87201096 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGTC ACGTTTTCCT CAAGACTGCG AGCCTTTTCG CGCTGATGCT GTCGGCCGCG
CCCGCCCTTG CCGCGCCCGC CCTTGCCGCG CCCGCCCTTG CCGCGGACGA ACAGGACCAG
CCCTCCGACG GCGGTCTTGG CGAAATCGTC GTGACCGCGC AGAAGCGTGC CGAACCGTTG
CAGAAGACGC CGATCTCGAT CGTGGCGCTG ACGGCGGACG ACATCGCGAA GAAGGGCATT
GCCGACCTTA CCGACCTGCG CTCGCAGGTG CCCGCGCTGC AGGTAACGCC GCATCCGAAC
AGCGCGACGA CAGCGCGTGT CTTCCTGCGC GGCGTCGGCA ACAACGACGA CCAGATCACC
GTCGATCCCA GCGTCGCGAT CTATCTCGAT GGCATCTACG TGGCGCGCGG GCAGGGGCTT
GCGGCCGAGA TCGCGGAGAT CGAGCGCATC GAGGTGCTGC GCGGCCCGCA GGGGTCGCTC
TACGGTCGCA ACGCCACGGG CGGTGCGATC AACTACATCG CACGGCAGCC CCGGCTTGGC
GAGTTCCACG CGCGCCAGTC GCTGGCCTAC GGCAACTACG ACCAGTTCCG TTCGCGCACG
AGCGTCAACG TTCCGGTCGG CGAAACCCTT GCCGTGGAAC TGGCCTATCT GCACAGCAGC
AAGGACGGCT TCGTCCGCAA CCTTGGTACC GGTGTGGAGC GTTTCGGGGA TCAGCGCCGC
GATGCCTATC GCGCGGCCGT GCTGTGGCAG CCGGCGCCGT CCTTCGAGCT GCGCTATGCC
TATGACCGGT CGGACATTGC CGATACCCCC GCGTTCATGG TCTCGGCGCC GTACTACCCG
CGCATGGCGG TTCGACCGAC CGCAGGCTCT CCCGCCGTCC GCGACCTTGC GGCGAATGAC
GTGACCGCGC AGGGCCATAG CCTCGTCGCG AGCTGGAACG CATCGGACGA GGTCACCATC
CGCTCGCTGA CGGGCTATCG CAAGCTCGCC AACTTCACCA ACCAGAACTA CCTGACCGGC
GTTGCCGGGC CATTCCCTGT CTTCGTCACC ACTTTCGACC AGAACCAGCG TCAGTGGAGC
GAGGAACTTC AGGTCGTCGG CTCTGCGCTC GACCGCCAGC TGGAATACAC GTTGGGCGCC
TATTTCTTCG ACGAGAAGGC CTTCAGCTAT GACACCACCG TGCCGACGGG GCGGGCGACG
ACACTGCGCA CGGCAACCGT GCGCAACCGT GCCTGGGCAC TCTATGGGCA GATGACCTGG
CGGCCCGAAG CGCTTGCAGG GGTCTATCTG ACCGGCGGGC TGCGCTGGTC GCGCGACAGC
CGCAAGGCAA CGCTGGACCA GACGTCGGTC GCACTGAACG GCACCAGGAC GGTCCGCCCC
CAGGGGCGCG GCGACAACAG CTTCACCGAC GTAAGCCCCA GCGTGATCCT GGGATACGAC
GTCAACCGCG ACGTCAACGT TTATGCAAAA TGGTCGCGCG GCTACAAGAC CGGCGGCTAC
AACCTGCGGG CCAGCACGAT AGAGCGTTTT GCCGAAGGCT ATGGCCCGGA GCGGCTCGAT
TCATTCGAAT TCGGCCTCAA GTCCAGCTGG CTCGATAATC GTCTTCGCGC CAACGTCGCG
GTGTTCCGGG CGAACTACCG GGATATCCAG GTCAACATCC AGTCCGATCC GGAGAACCCC
GCCGTCACCG ACATCTTCAA CGCAGGCGAG GCGCGCATCC AGGGTATCGA ACTGGACCTC
ACGGCCAAGC CATCGCGGGC GCTTACGGTC AATGCCAACT ACGCCTTCCT CGATGCCGGC
TACCGCCGGA TCACCGATCA GATCACCGGC GCGAACATCG CCTCGCGCTT CAACTTCGTC
GAGGCGCCGC GTCACACCCT GACCGTAGGC GCGGAATGGA CCCTGCCGGA AACGCCGCTG
GGCGTCCCAT CGGCAAGCGT CGACTACTAC ATGCAGAGCC GCAAATTCTC CTCGACCACC
GATGCGCGCT ACATCGTTGG CGACTACGGC CTGCTCAATG CGCGGCTCAG CCTTTCGGAG
ATCCCGGTGG GCTTCGGCAA GTGGCGGCTT TCCGCCTATG CCCGCAACCT GACGGATACA
AAGTACTACA TCGCCAACTT TTCTGCCGGG CTGCCCGCCG CCTTCTTTGG TGAACCGCGC
ACGTATGGCA TCGAATTGAA CTTCGAATAT TGA
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| Protein sequence | MSGHVFLKTA SLFALMLSAA PALAAPALAA PALAADEQDQ PSDGGLGEIV VTAQKRAEPL
QKTPISIVAL TADDIAKKGI ADLTDLRSQV PALQVTPHPN SATTARVFLR GVGNNDDQIT
VDPSVAIYLD GIYVARGQGL AAEIAEIERI EVLRGPQGSL YGRNATGGAI NYIARQPRLG
EFHARQSLAY GNYDQFRSRT SVNVPVGETL AVELAYLHSS KDGFVRNLGT GVERFGDQRR
DAYRAAVLWQ PAPSFELRYA YDRSDIADTP AFMVSAPYYP RMAVRPTAGS PAVRDLAAND
VTAQGHSLVA SWNASDEVTI RSLTGYRKLA NFTNQNYLTG VAGPFPVFVT TFDQNQRQWS
EELQVVGSAL DRQLEYTLGA YFFDEKAFSY DTTVPTGRAT TLRTATVRNR AWALYGQMTW
RPEALAGVYL TGGLRWSRDS RKATLDQTSV ALNGTRTVRP QGRGDNSFTD VSPSVILGYD
VNRDVNVYAK WSRGYKTGGY NLRASTIERF AEGYGPERLD SFEFGLKSSW LDNRLRANVA
VFRANYRDIQ VNIQSDPENP AVTDIFNAGE ARIQGIELDL TAKPSRALTV NANYAFLDAG
YRRITDQITG ANIASRFNFV EAPRHTLTVG AEWTLPETPL GVPSASVDYY MQSRKFSSTT
DARYIVGDYG LLNARLSLSE IPVGFGKWRL SAYARNLTDT KYYIANFSAG LPAAFFGEPR
TYGIELNFEY
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