Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3084 |
Symbol | |
ID | 3916699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3302873 |
End bp | 3305065 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640445867 |
Product | TonB-dependent receptor |
Protein accession | YP_498353 |
Protein GI | 87201096 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTC ACGTTTTCCT CAAGACTGCG AGCCTTTTCG CGCTGATGCT GTCGGCCGCG CCCGCCCTTG CCGCGCCCGC CCTTGCCGCG CCCGCCCTTG CCGCGGACGA ACAGGACCAG CCCTCCGACG GCGGTCTTGG CGAAATCGTC GTGACCGCGC AGAAGCGTGC CGAACCGTTG CAGAAGACGC CGATCTCGAT CGTGGCGCTG ACGGCGGACG ACATCGCGAA GAAGGGCATT GCCGACCTTA CCGACCTGCG CTCGCAGGTG CCCGCGCTGC AGGTAACGCC GCATCCGAAC AGCGCGACGA CAGCGCGTGT CTTCCTGCGC GGCGTCGGCA ACAACGACGA CCAGATCACC GTCGATCCCA GCGTCGCGAT CTATCTCGAT GGCATCTACG TGGCGCGCGG GCAGGGGCTT GCGGCCGAGA TCGCGGAGAT CGAGCGCATC GAGGTGCTGC GCGGCCCGCA GGGGTCGCTC TACGGTCGCA ACGCCACGGG CGGTGCGATC AACTACATCG CACGGCAGCC CCGGCTTGGC GAGTTCCACG CGCGCCAGTC GCTGGCCTAC GGCAACTACG ACCAGTTCCG TTCGCGCACG AGCGTCAACG TTCCGGTCGG CGAAACCCTT GCCGTGGAAC TGGCCTATCT GCACAGCAGC AAGGACGGCT TCGTCCGCAA CCTTGGTACC GGTGTGGAGC GTTTCGGGGA TCAGCGCCGC GATGCCTATC GCGCGGCCGT GCTGTGGCAG CCGGCGCCGT CCTTCGAGCT GCGCTATGCC TATGACCGGT CGGACATTGC CGATACCCCC GCGTTCATGG TCTCGGCGCC GTACTACCCG CGCATGGCGG TTCGACCGAC CGCAGGCTCT CCCGCCGTCC GCGACCTTGC GGCGAATGAC GTGACCGCGC AGGGCCATAG CCTCGTCGCG AGCTGGAACG CATCGGACGA GGTCACCATC CGCTCGCTGA CGGGCTATCG CAAGCTCGCC AACTTCACCA ACCAGAACTA CCTGACCGGC GTTGCCGGGC CATTCCCTGT CTTCGTCACC ACTTTCGACC AGAACCAGCG TCAGTGGAGC GAGGAACTTC AGGTCGTCGG CTCTGCGCTC GACCGCCAGC TGGAATACAC GTTGGGCGCC TATTTCTTCG ACGAGAAGGC CTTCAGCTAT GACACCACCG TGCCGACGGG GCGGGCGACG ACACTGCGCA CGGCAACCGT GCGCAACCGT GCCTGGGCAC TCTATGGGCA GATGACCTGG CGGCCCGAAG CGCTTGCAGG GGTCTATCTG ACCGGCGGGC TGCGCTGGTC GCGCGACAGC CGCAAGGCAA CGCTGGACCA GACGTCGGTC GCACTGAACG GCACCAGGAC GGTCCGCCCC CAGGGGCGCG GCGACAACAG CTTCACCGAC GTAAGCCCCA GCGTGATCCT GGGATACGAC GTCAACCGCG ACGTCAACGT TTATGCAAAA TGGTCGCGCG GCTACAAGAC CGGCGGCTAC AACCTGCGGG CCAGCACGAT AGAGCGTTTT GCCGAAGGCT ATGGCCCGGA GCGGCTCGAT TCATTCGAAT TCGGCCTCAA GTCCAGCTGG CTCGATAATC GTCTTCGCGC CAACGTCGCG GTGTTCCGGG CGAACTACCG GGATATCCAG GTCAACATCC AGTCCGATCC GGAGAACCCC GCCGTCACCG ACATCTTCAA CGCAGGCGAG GCGCGCATCC AGGGTATCGA ACTGGACCTC ACGGCCAAGC CATCGCGGGC GCTTACGGTC AATGCCAACT ACGCCTTCCT CGATGCCGGC TACCGCCGGA TCACCGATCA GATCACCGGC GCGAACATCG CCTCGCGCTT CAACTTCGTC GAGGCGCCGC GTCACACCCT GACCGTAGGC GCGGAATGGA CCCTGCCGGA AACGCCGCTG GGCGTCCCAT CGGCAAGCGT CGACTACTAC ATGCAGAGCC GCAAATTCTC CTCGACCACC GATGCGCGCT ACATCGTTGG CGACTACGGC CTGCTCAATG CGCGGCTCAG CCTTTCGGAG ATCCCGGTGG GCTTCGGCAA GTGGCGGCTT TCCGCCTATG CCCGCAACCT GACGGATACA AAGTACTACA TCGCCAACTT TTCTGCCGGG CTGCCCGCCG CCTTCTTTGG TGAACCGCGC ACGTATGGCA TCGAATTGAA CTTCGAATAT TGA
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Protein sequence | MSGHVFLKTA SLFALMLSAA PALAAPALAA PALAADEQDQ PSDGGLGEIV VTAQKRAEPL QKTPISIVAL TADDIAKKGI ADLTDLRSQV PALQVTPHPN SATTARVFLR GVGNNDDQIT VDPSVAIYLD GIYVARGQGL AAEIAEIERI EVLRGPQGSL YGRNATGGAI NYIARQPRLG EFHARQSLAY GNYDQFRSRT SVNVPVGETL AVELAYLHSS KDGFVRNLGT GVERFGDQRR DAYRAAVLWQ PAPSFELRYA YDRSDIADTP AFMVSAPYYP RMAVRPTAGS PAVRDLAAND VTAQGHSLVA SWNASDEVTI RSLTGYRKLA NFTNQNYLTG VAGPFPVFVT TFDQNQRQWS EELQVVGSAL DRQLEYTLGA YFFDEKAFSY DTTVPTGRAT TLRTATVRNR AWALYGQMTW RPEALAGVYL TGGLRWSRDS RKATLDQTSV ALNGTRTVRP QGRGDNSFTD VSPSVILGYD VNRDVNVYAK WSRGYKTGGY NLRASTIERF AEGYGPERLD SFEFGLKSSW LDNRLRANVA VFRANYRDIQ VNIQSDPENP AVTDIFNAGE ARIQGIELDL TAKPSRALTV NANYAFLDAG YRRITDQITG ANIASRFNFV EAPRHTLTVG AEWTLPETPL GVPSASVDYY MQSRKFSSTT DARYIVGDYG LLNARLSLSE IPVGFGKWRL SAYARNLTDT KYYIANFSAG LPAAFFGEPR TYGIELNFEY
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