| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3072 |
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| Symbol | |
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| ID | 3916686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3291337 |
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| End bp | 3292119 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445854 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_498341 |
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| Protein GI | 87201084 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.408815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCG ACAGCACGAC CAGCGCGGTC GTCACCGGCG GTGCATCCGG CCTCGGCCGC
GCAACGGCAG AGGCGCTCGC GGCCGCCGGG GTGAAGGTCG CCATATTCGA CGTGAACGAG
GAACTCGGCG AGCAGGTCGC CGCCGCGATC GGCGGGCTGT TCTGCAAGGT CGACATCACC
AGCGAGGAGT CGGTCGTCGA AGGCTTTGCC AAGGCGCGCG CCGCGCACGG CCAGGAACGC
ATCTGCGTCC ACTGCGCGAT GACCCAGCGC AAGGGCCGGA CGATCAGCCG CAACAAGGAG
ACCGGCGAGT TCGTTCGCTT CCCGACGGAG GACTATGCCT TTGCCGCGCA GGGCATTCTG
GTCGCCAGCT ACCGTGTCGC CTCGCTTTCC GCGCTTGGCA TGGCGGGGCT TGATCCGCTG
GAAGACGGCG AACGCGGAAC GATCATTCTC ACCGCCTCGG TCGCGGCGCA GGACGCCCAG
ATCGGGCAGG TGGCCTACGG TTCGCTCAAG GCCGGGGTGA ACGGCCTGGT CCTGCCGATG
GCACGCGACC TGATGGACCT CGGCATCCGC GTCAACTCGA TCATGCCGGG CATCTTCGGC
ACGCCGCTGC TCGGCCGCCT GCCGGAAAAG GTGCTCGACA GTCTCAGCGC TTCGGTGCCG
TTCCCCAAGC GGCTCGGCAA GCCCGAGGAA TATGCCAGCC TTGCGATGGA ACTGGTGCGC
AATTCCTATT TCAACGGCCA GTGCATCCGC CTCGACGGCG CGATCCGCAT GGCCCCGCGC
TGA
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| Protein sequence | MKIDSTTSAV VTGGASGLGR ATAEALAAAG VKVAIFDVNE ELGEQVAAAI GGLFCKVDIT
SEESVVEGFA KARAAHGQER ICVHCAMTQR KGRTISRNKE TGEFVRFPTE DYAFAAQGIL
VASYRVASLS ALGMAGLDPL EDGERGTIIL TASVAAQDAQ IGQVAYGSLK AGVNGLVLPM
ARDLMDLGIR VNSIMPGIFG TPLLGRLPEK VLDSLSASVP FPKRLGKPEE YASLAMELVR
NSYFNGQCIR LDGAIRMAPR
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