Gene Saro_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3050 
Symbol 
ID3916662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3265879 
End bp3266520 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID640445830 
Producthypothetical protein 
Protein accessionYP_498319 
Protein GI87201062 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.668326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCT CCGCACTCGA CCTTGCCAGC CTGCTCTGCT CGCGCCTCTG CCACGATATG 
CTCAGCCCCG TCGGCGCACT GTCCAATGGT CTGGAACTTC TTGCCGACGA GAAGGACCCC 
GAGATGCGCC AGCGCTGCTT CGAGCTTCTC GAACAGAGCG CGAAGGCATC GGCCGACAAG 
CTCAAGTTCT TCCGCCTCGC CTTCGGCGCC GCCGGCGGGT TTGGCGAACA GGTGCCGGTC 
AACGAAGCGC GCCCGCTGGT CGACGCGCTC GTCGGCGCGA ACGGGCGGGT TGCCGTGAAC 
TGGATGTTCG GCGTGGACAG CCTGCCCAAG CCTGCGGTCA AGACGCTGCT CAACCTTGCG 
CTGATCGGGC TCGACGCGCT GGTGCGCGGC GGAACGCTGG ACGTCGGCGC CGAAGTCCGT 
GACGGGGTAA CGGAGATCGT CGTGCGCGCT GCCGGCCAGC GCATCGCCTT CGACCCGGCC 
ATCGGGCAGG CCCTGGAAGG CGCCCTTCCG ACAAGCGAAC TGTCGAGCCG GACCGCCCCT 
GCGGCGATGG TCCACCAACT CGCCGCTGCG GTCGGCGGCG GCGTACAGGT CCACATCGCG 
CCCGACAGCC TCGTCCTCGG CGCGGTCCTT CCCTCGGCCT GA
 
Protein sequence
MTVSALDLAS LLCSRLCHDM LSPVGALSNG LELLADEKDP EMRQRCFELL EQSAKASADK 
LKFFRLAFGA AGGFGEQVPV NEARPLVDAL VGANGRVAVN WMFGVDSLPK PAVKTLLNLA 
LIGLDALVRG GTLDVGAEVR DGVTEIVVRA AGQRIAFDPA IGQALEGALP TSELSSRTAP 
AAMVHQLAAA VGGGVQVHIA PDSLVLGAVL PSA