| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3046 |
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| Symbol | |
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| ID | 3916658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3261197 |
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| End bp | 3262195 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445826 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_498315 |
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| Protein GI | 87201058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTACCCA TATGGCCGGG AATGGGGGGC ACCGACAGCA TCATTTCCGG ACAGGTCCCC
GCAGGTGGCC AGAGACTCGA CAAGGCCCTG GCCGACGCCA GCGGCCTCTC GCGCGAGCGG
GTCAAGGCTC TGCTTGGTGA AGGGCGTGTC CGGCTGGGTG GGGCGGTAGT CTCGCAGGCC
TCGCTCAAGC CCGCCGAGGG CACACCGTTC GAAATCCACG TACCCGAGGC GGCCCCCGCC
GAAGCCATCG CGCAGGCAAT CCCGCTGGTG GTCGTCCACG AGGACGACGC CCTGATCGTG
GTCGACAAGC CTGCGGGACT TGTGGTCCAT CCGGCTGCGG GCAACCCCGA CGGGACGCTG
GTCAACGCCC TGCTGCATCA CTGCCGTGGG CAGCTTTCCG GCATTGGCGG GGTGGCCCGG
CCGGGGATCG TCCATCGCAT CGACAAGGAT ACTTCGGGCT TGCTGGTCGT GGCGAAGACC
GACGCCGCCC ACGAGGGACT GGCACGGCAG TTCGCCGATC ATTCGATCAC GCGTGCGTAC
AAGTGCGTGA CCGCAGGCGT GCCGATGCCG CCTTCTGGCA CGGTGCGCGG GGCGATCGCG
CGATCGAGCC ATGATCGCAA GAAGATGGCG CTGGTCGATG ACGGGCGCGG GAAGCATGCG
GTCACCCATT TCCGAACGCT CGCAGCGCTT CAGGGCGCCG CGCTTGTCGA GTGCCGGCTG
GAGACGGGGC GAACCCACCA GGTGCGCGTT CACCTTGCGT CAATCGGCCA TCCGCTATTG
GGTGATCCGG TCTATGGACG CACACCTTCA CGCCTCAGGC CGCTGCTCCA GCGGCTCGGG
TTTCACCGTC AGGCGCTTCA CGCGGCGGAG CTGGGATTCA TCCACCCCGT CACCGGCGCA
CCGCTCCACT TCGCCAGTCC GACGCCCGTC GACATGCGGG AACTCATCGT CGAACTGTGC
GCTGAAGGTC AGGATGCAAA GCTCATGGCG ATGGTGTAG
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| Protein sequence | MLPIWPGMGG TDSIISGQVP AGGQRLDKAL ADASGLSRER VKALLGEGRV RLGGAVVSQA
SLKPAEGTPF EIHVPEAAPA EAIAQAIPLV VVHEDDALIV VDKPAGLVVH PAAGNPDGTL
VNALLHHCRG QLSGIGGVAR PGIVHRIDKD TSGLLVVAKT DAAHEGLARQ FADHSITRAY
KCVTAGVPMP PSGTVRGAIA RSSHDRKKMA LVDDGRGKHA VTHFRTLAAL QGAALVECRL
ETGRTHQVRV HLASIGHPLL GDPVYGRTPS RLRPLLQRLG FHRQALHAAE LGFIHPVTGA
PLHFASPTPV DMRELIVELC AEGQDAKLMA MV
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