Gene Saro_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3039 
Symbol 
ID3916651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3253707 
End bp3254489 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID640445819 
Producthypothetical protein 
Protein accessionYP_498308 
Protein GI87201051 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACGAA CGCGCAAAGA ACAGCAAAAG GATTTTGTCA TGCGTACGTC CATCAAGGCC 
CTTCTGGCCT CGACCCTCCT TGCGGCCGGT CTGGCCGCTA CCCCGGCCTT CGCGCAGGAA
GAAGCCGCAA GCGATTTCAC CGTCACCGGC AACGTTGCCG CCGTCACCGA CTATCGCTTC
CGCGGCATCT CGCTCTCGGG CGGCGACTTC GCGGTTCAGG GCTCGATCGG CGTCAGCCAC
TCGAGCGGCT TCTATGTCGG CGCCTGGGCA TCCAGCCTCG AGGACTCGCC GGTCTATGGC
AGCACCGAAC TCGACGTCTA TGGCGGCTGG ACCGGTGAAG TCACCTCCGG CCTGACCTTC
GACGGCGGCC TGCTCTACTA TGTCTATCCC AACGGCGACG TCGGCAAGGC CAACGTGTAC
GAGCCCTATG CCTCGCTTTC GGCAGGCGTC GGCCCGGCAA CCGCCAAGGT CGGCGTGGCC
TATGCGTGGA AGCAGGATTC GCTCGGCGGC GACGACAACC TCTATGTCTA TGGCGAGCTT
TCCGGTGCGA TCCCCGAAAC GCCGATCTCG CTTTCGGCGC ACCTGGGGTA CACCGACGGC
GCGCTGTCGC CCAAGCTGCT GACCGGTGAA AGCACCAAGG GCGGCTTCGA CTACAACGTC
GGCGCGACCT ACAATGTCAC CGACAAGCTG GCCGTGGGCG TCAGCTACGT CGGCGTCGAC
GGCGCTTCGA TCGACAGCTT CTCGAACGAC GCCGTCGTCG GCACGATCAA GCTCTCGTTC
TGA
 
Protein sequence
MGRTRKEQQK DFVMRTSIKA LLASTLLAAG LAATPAFAQE EAASDFTVTG NVAAVTDYRF 
RGISLSGGDF AVQGSIGVSH SSGFYVGAWA SSLEDSPVYG STELDVYGGW TGEVTSGLTF
DGGLLYYVYP NGDVGKANVY EPYASLSAGV GPATAKVGVA YAWKQDSLGG DDNLYVYGEL
SGAIPETPIS LSAHLGYTDG ALSPKLLTGE STKGGFDYNV GATYNVTDKL AVGVSYVGVD
GASIDSFSND AVVGTIKLSF