Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3036 |
Symbol | |
ID | 3916648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3249171 |
End bp | 3251885 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640445816 |
Product | TonB-dependent receptor |
Protein accession | YP_498305 |
Protein GI | 87201048 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.637497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACC AGGTTCGGCT CAGGTCGCGG GCCATGAGGG CATTCGCTGC GAGCACCATC CTGTCGACCG TCGTGCTGCC GGCGGCAGCC TATGCCGCTG AAGTCACAGA GGTTGCCGCG CAGCCTGCCA TCGAGACCAC GCCTGCCGAG GAGCAGGTCC AGCCCGAAGG CTTCGGCGAC ATCGTGGTCA CCGCGACCCG CCAGGCGCAG TCGATCCAGA AGGTGCCGAT CTCGATCCAG GCGCTGAACG CCGACACGCT CCAGCAGCGG CAGGTCAAGG GCCTGACCGA CTTCGCCACG CTCATGCCTT CGGTCAGCTT CGCCGGCATC GGCCCGGGCC GCAATACGCC CTATTTCCGC GGCATCGTGC CTGCGGGTGG CGCGCGCGAA TCGGTGGGCT ACTACATCGA CGACATTCCG ATCACCGGCA CCGGCCTGCC CGACATCCAC GTCTACGACG TCGAACGCGT CGAGGGCCTG TCCGGGCCGC AGGGCACGCT GTACGGCGCG GGCTCGCTGG CCGGCACGAT CCGCTTCATC ACCAACAAGC CCAAGTTCGA GCGGTTCGAG TACGGCTACG ATGCCGAGGT GAACAAGTAC GGCAAGGGCG ACTTCGGCGG GCAGTACCAG TCCTACATCA ACGTGCCCGT CGCCAGCAAT CTGGCGGTGC GCGCGATGGG CTACTACCGC CGCGACGGCG GATATGTCGA CAACACGCCG AACAACGGCA AGTTCAATGA CGGCAGTTCC TCGACCCTGA GCCTTGGCGA CAACAATCCC GATACTTTCT ACACGCTCGA CAATTCCGAC ATCGCGCAGG ACGACTACAA CTCGATCGAG GAATATGGCG GGCGCCTGCA GGTGCTGTGG GAAATGGCGC CCGGCTGGGA GATCGCCTCG CAGCTTACCG CGCAGCAGCA GATCGCCAAC GGGTACTTCG GCTTCGACCC GCGCGTGGGC GACCTTGAAG TGCACGACTT CGACACGACC CAGCAGAACG ACAAGTGGTA CCAGGCGGCG CTGACCGTCC ATGGCCATAT CGGAGACTGG GACGTGGTCT CCTCGACCGG CTACTACCAG CGCCAGATCA ACCTGCTCAA CGACTATACC TACTACACCG TCACCTATGA CCGCTTCGGC GCCGGTTACG AGAACTACCT CCAGTTCTTC GACAAGAACG GCTGCACGGG TTCTGGCGAC GCGATGAAGT GCACCAGCCT GATCGATCCG ACGCAGTTCT ATCGGGGGCT GCGCAACGAG AACAAGTTCA CCCAGGAACT GCGCTTCACC ACGCCCAAGT CGTGGCCGTT CGACGTGACC TTCGGCGGTT TCTATCACCG GCAGAAGAAC GAGGTGAACA ACGACTACTC GATCCATGGG CTGGACCAGA TCGCAGGCTA TACCCAGTCG GGCGGGGGCG ACAGCAACCC GGAAGGGTTC GGCATTCCGA CGACGGCCGG CGGCACGATG GTCGTGGGCT CGCCGGCGGT GAAGCGCGAT GCCTTCTACA TGAGCGAGCA GAACCAGTAC TGGAACGACT ATGCGCTGTT CGCCGAAGGG CACTACAACA TTACCCCGAC GCTCAAGCTG ACGGGCGGCA TCCGCTATTT CTGGACCAAC TTCCGTGTGC TCGGTTTCGC GGGCGTTGCC GCTTCTGCAC GCAACACGAT CACGTCGCTC TATGTGCCCA CTGGCGAATA TGGCTGCCCC GTGCCGCTTC CGGCGGAGCG CCTGCAGTGC CTCAACTCGA ACTTCGCAGC CGCCGATGGC GTGGGCCGCT ACAAGGAGGA AGGCGAAACC CACAAGGTCG CGCTCAACTG GCAGTTCGAA CCGTCGAAGA TGGTCTATTT CAACTATTCG ACCGGCTTCC GCCCTGGCGG CTTCAACCGT CCGTTGCGCA TCCGCGGCGT CGGCGTGGCC ACGGTGCCGT CTTTCGAATC TGAAAGGCTG ACCAACTTCG AGCTGGGCTT CAAGACCACG TGGAACAACA TGTTCCGCTT CAACGCCTCG CTCTATTACG AGAACTGGGA CAACATCCAG TACAGCGTGG TCATCGCGGG CACGCAGGGC GCGGGCATGA CGGGCAACGC TGGCAAGGCG CGCGTCTATG GCGTGGAGTT CGACGCGGAC CTCAAGCTTG GCAAGTTCAC CATTTCGACC AACGGCGCCT ACAACAACGC CGCGCTCAAG GGGAACTTCT GCAACTTCAA GGTCGACACC TCGACGCTGG CGATCACCCA GCTTGCGACC TGCACCCCCG GCGCCACTTT CGGCAGCCCG GCAGTGGCCG AAGTGGCGGC GACCGACGGC ACCCGCCTGC CGCGCCAGCC GCGTTTCAAG GGCACGACCT CGGTGCGCTA CGACACGCAG CTTGGCGACA TGGACCTCTA CCTGCAGGGC GCCGCGCTGT ATCAGACCAA CGCCACGCAG AACCTCAATG TCTACAACAA CAACCTGCTC GTCTGCCCCG ACATCGCGGA CGAAGCGACC GATGCCGGCC GTTCGTGCGC GACCCCGGGC TTCGTCAGCT TCGACTTCTC GGGCGGGATC AAGAAGGACA ACTGGACGCT CGACCTGTTC ATCCAGAACG CCTTCGACAA GCGCGGCGAG CTGACCCGCA ACACCTTCTG CTCGATCCAG TTCTGCTCGG ACTCGTCGCG CACCTTCACG ATCAAGCCGC AGTTCTTCGG AATGCGCTGG GGCCAGAAAT TCTGA
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Protein sequence | MKNQVRLRSR AMRAFAASTI LSTVVLPAAA YAAEVTEVAA QPAIETTPAE EQVQPEGFGD IVVTATRQAQ SIQKVPISIQ ALNADTLQQR QVKGLTDFAT LMPSVSFAGI GPGRNTPYFR GIVPAGGARE SVGYYIDDIP ITGTGLPDIH VYDVERVEGL SGPQGTLYGA GSLAGTIRFI TNKPKFERFE YGYDAEVNKY GKGDFGGQYQ SYINVPVASN LAVRAMGYYR RDGGYVDNTP NNGKFNDGSS STLSLGDNNP DTFYTLDNSD IAQDDYNSIE EYGGRLQVLW EMAPGWEIAS QLTAQQQIAN GYFGFDPRVG DLEVHDFDTT QQNDKWYQAA LTVHGHIGDW DVVSSTGYYQ RQINLLNDYT YYTVTYDRFG AGYENYLQFF DKNGCTGSGD AMKCTSLIDP TQFYRGLRNE NKFTQELRFT TPKSWPFDVT FGGFYHRQKN EVNNDYSIHG LDQIAGYTQS GGGDSNPEGF GIPTTAGGTM VVGSPAVKRD AFYMSEQNQY WNDYALFAEG HYNITPTLKL TGGIRYFWTN FRVLGFAGVA ASARNTITSL YVPTGEYGCP VPLPAERLQC LNSNFAAADG VGRYKEEGET HKVALNWQFE PSKMVYFNYS TGFRPGGFNR PLRIRGVGVA TVPSFESERL TNFELGFKTT WNNMFRFNAS LYYENWDNIQ YSVVIAGTQG AGMTGNAGKA RVYGVEFDAD LKLGKFTIST NGAYNNAALK GNFCNFKVDT STLAITQLAT CTPGATFGSP AVAEVAATDG TRLPRQPRFK GTTSVRYDTQ LGDMDLYLQG AALYQTNATQ NLNVYNNNLL VCPDIADEAT DAGRSCATPG FVSFDFSGGI KKDNWTLDLF IQNAFDKRGE LTRNTFCSIQ FCSDSSRTFT IKPQFFGMRW GQKF
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