Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3007 |
Symbol | |
ID | 3916618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3225058 |
End bp | 3225801 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640445786 |
Product | hypothetical protein |
Protein accession | YP_498276 |
Protein GI | 87201019 |
COG category | [R] General function prediction only |
COG ID | [COG5529] Pyocin large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGCG AAGCGCTCGC ATGGGCTTTC AAGCAAACCT GCAAGAGCAG CAGCGTGAAG TTTACGCTGG TGGCCATGTG CGAATGCGCC AATTACCGGA CCGGCGTGAT CCATCCATCG ATCGATCACC TCTCCGAAAT TACCGGACAG AACCGCAAGA CCATCATCGC CAACGTGGCA GAGTTGGAAG CCAGTGGTGT CATCGTTGAT ACCGGCGAGC GCATCGGTCG GACCAAGCAG ATCAAGGTCT ATCGCTTGGC CATGGAAACA GTTCCAAAAA CGGAACAGTC CCAAAAACGG AACAGTACCG AAAATGCTCC GAAACAGTCC CAAAAACGGG ACACGGAACC TTCTAAGGAA CCTTCATGTT CTACAGAACC TAAAGGTTCT TCCGAACATA AGGCGCGCGA GGCCAAACCT TTCCGGATGA TGGCTGATTG GTCGCCATCG CCACTGCCGA GCAATGTTCA AGCTCTGGTG GACCTTTGGC CACCCGGCAG GTTCGAGCGC GAGATCGACC AGTTCCGCGA TTACTGGCTC GACCGCACAG ATAGGCGCCC CGGATGGGAT CGCACCTTCC ACAATCGCAT CCGCGACATT CACGACCGAG TTATGAGGGA AACCCGCAAT GACCGCCCAG CTAGCAACGA CCAAGGCATC ACAAACCCTT ACGCTCGCGC CGTCGTTGCC CGACAAGCTG AACGCGCTGG TCATGTCGTC GGACAACCCG ATAGTTGGCC CTAA
|
Protein sequence | MSSEALAWAF KQTCKSSSVK FTLVAMCECA NYRTGVIHPS IDHLSEITGQ NRKTIIANVA ELEASGVIVD TGERIGRTKQ IKVYRLAMET VPKTEQSQKR NSTENAPKQS QKRDTEPSKE PSCSTEPKGS SEHKAREAKP FRMMADWSPS PLPSNVQALV DLWPPGRFER EIDQFRDYWL DRTDRRPGWD RTFHNRIRDI HDRVMRETRN DRPASNDQGI TNPYARAVVA RQAERAGHVV GQPDSWP
|
| |