| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2968 |
|---|
| Symbol | |
|---|
| ID | 3917403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3185650 |
|---|
| End bp | 3188145 |
|---|
| Gene Length | 2496 bp |
|---|
| Protein Length | 831 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640445746 |
|---|
| Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
|---|
| Protein accession | YP_498237 |
|---|
| Protein GI | 87200980 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.205655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCC CGACGAGTTT CAGCCAGAAG GACCAGCCGG CGCAAGCGCG TGAACGGCTG
GTGGTCATCG GCAACGGCAT GGCCGGGTGC CGGGCGGTGG AGGAAATCCT CGCTCGCGAT
CCCGCCCGCT TCGACGTCAC GATCTTCGGC GCGGAACCGC GCGTGAACTA CAACCGGATC
ATGCTTTCGC CCGTGCTGGC GGGCGAGAAG GCGTTCGACG ACATCGTGAT CAACGATGCC
TCCTGGTACG CCGACAACGG CATCACGCTG GTGTCGGGGG ATCCGGTCGT GTCGATCGAC
CGCGAGACGC AGACGGTCGT GGCTCGGTCC GGCCGGGTCG AGCCCTACGA TCGCCTGCTG
ATCGCCACCG GCTCCGACCC GTTCATCATT CCGGTGCCCG GACACGATCT TCCCGGCGTC
GTTACCTTCC GCGATCTCGA TGACGTGGAG CGCATGCTGG CCGCCTCGGA GCGGGGCGGC
AGTGCGGTCG TGATCGGGGG CGGGCTGCTC GGCCTCGAGG CGGCACATGG CCTGGCCCTG
CGCGGGATGA AGGTCACCGT TGTCCACCTG ATGCCGACGC TGATGGAGCG GCAGCTCGAC
GAGGCAGCGG GCTACCTTCT GCGCAGCGAG CTGGAGCGAC GCGGGCAGAC CATCGTCACC
GGGGGGGACA CCGCCGAGAT CCTGGGCAGG GACGGCCATG TCTCGGGCGT GAAGCTCAAG
GACGGGCGCG AGTTCGCGGC CGACATCGTC GTGATGGCGG TCGGCATCCG CCCGGCGACG
GGCCTGGCGC GCGCCGCGGG CCTCGACGTC GAGCGCGGCA TCCTTGTCGA TGATCACATG
ATGACCTCGG ACCCGGCGGT CATGGCCGTG GGCGAATGCG TGCAGCATCG TGGCCAGTGC
TACGGCCTTG TCGCGCCGCT GTGGGACATG TGCCGTGCCC TGGCCGACTG CGTGACCGGC
AACCCCAGCG GATACGAAGG CTCGGTGACC TCCACCAAGC TCAAGGTTTC GGGGATCGAC
CTGTTCTCGG CCGGAGACTT TTCCGGAGGC GAAGGGGCCG AGGATATCGT CATGCGCGAT
GCCTCGCGCG GGATATACAA GCGCGTGATC GTCCGCGAGG ACCGCGTGGT GGGCGCCGTG
CTTTACGGCG ATACCGGCGA CGGTTCCTGG TACTTCGACC TGCTGAAGAA GGGCGAGGAC
ATCTCGGAAA TCCGCGAGGC GCTGATCTTC GGGCAGGCCT TTGCCGCGGG AGGCGCCCTT
GCGGACCCTA ATGCAGCCGT TGCCGCCCTT TCGGACGATG CCGAAATCTG CGGTTGCAAC
GGCGTTTCCA AGGGCAAGGT GGTCGAGACC ATCAAGGGCG GGGCATGCAG CCTCGATGCG
GTCCGCAGCC AGTGCAAGGC GTCCGCGAGT TGCGGCAGCT GCACGGGCCT TGTCGAAAGC
CTGCTGCGCC TGACGCTGGG CGGAGAGGTC GAGGCCGGGC CGAAGACCAT GTGCAAGTGC
ACAAGCTTCA CCCATTCCGA CGTGCGCCGC CTGATCGTGG AGAAGAACCT GAGGCTTATC
CCGCAGGTCA TGCAGGAACT GGGCTGGTCG ACGCCCGATG GCTGCGCCTC GTGCCGCCCC
GCGCTCAACT ACTACCTGCT CTGCGCCTGG CCGGGCGAAT ATGAAGACGA TCAGCAGAGC
CGCTTCGTCA ACGAGCGCAT GCACGCCAAC ATCCAGAAGG ACGGCACCTA TTCCGTGGTT
CCGCGCATGT GGGGCGGGCT TACCAACCCC CGCGAACTGC GCGCCATCGC CGACGTGGTC
GAGAAGTACA ATGCGCCGAT GGTCAAGGTG ACCGGCGGCC AGCGGCTGGA TATCTTCGGC
ATCCGCAAGG AGGACCTGCC GGCGGTCTGG GCGGACCTGA ACGCGGCGGG GATGGTGTCG
GGCCATGCCT ACGGCAAGTC GCTGCGCACG GTGAAGACTT GTGTCGGATC GGAATGGTGC
CGCTTCGGTA CGCAGGATTC CACCGGACTG GGCGTGAAGC TGGAACAGAT GACGTGGGGC
TCCTGGATGC CCCACAAGTT CAAGATCGCC GTATCGGGCT GCCCGCGCAA TTGCGCCGAA
GCGACGATCA AGGACTTCGG GGTGGTCTGC GTCGACAGCG GCTATGAACT CCATGTCGGC
GGCAACGGCG GGATCAAGGT CCGCGCGACC GATCTGCTCT GCCGCGTCGC CACCGAGGCC
GAGGCGATGG AGGTCTGCGC GGCTTTCATC CAGCTTTACC GCGAACAGGC ATGGTATCTC
GAGCGGACCG CCCCGTGGAT CGAGCGCGTG GGTCTGGAAC ACGTGAAGGC CGCGTTGTTC
GACGATCCCG AGGCCGTCGC CACGCTGGCC GCGCGGTTCC GCCATTCCCA GCAGTTCATG
CAGGACGATC CCTGGGCAAA GCGCGCCCGC GGCGCGGACG CGGAACTGCA CCAGCACCTG
GCCGAGGTGC GCCCCTTCCA GATGGAGAAT GCATGA
|
|---|
| Protein sequence | MNAPTSFSQK DQPAQARERL VVIGNGMAGC RAVEEILARD PARFDVTIFG AEPRVNYNRI
MLSPVLAGEK AFDDIVINDA SWYADNGITL VSGDPVVSID RETQTVVARS GRVEPYDRLL
IATGSDPFII PVPGHDLPGV VTFRDLDDVE RMLAASERGG SAVVIGGGLL GLEAAHGLAL
RGMKVTVVHL MPTLMERQLD EAAGYLLRSE LERRGQTIVT GGDTAEILGR DGHVSGVKLK
DGREFAADIV VMAVGIRPAT GLARAAGLDV ERGILVDDHM MTSDPAVMAV GECVQHRGQC
YGLVAPLWDM CRALADCVTG NPSGYEGSVT STKLKVSGID LFSAGDFSGG EGAEDIVMRD
ASRGIYKRVI VREDRVVGAV LYGDTGDGSW YFDLLKKGED ISEIREALIF GQAFAAGGAL
ADPNAAVAAL SDDAEICGCN GVSKGKVVET IKGGACSLDA VRSQCKASAS CGSCTGLVES
LLRLTLGGEV EAGPKTMCKC TSFTHSDVRR LIVEKNLRLI PQVMQELGWS TPDGCASCRP
ALNYYLLCAW PGEYEDDQQS RFVNERMHAN IQKDGTYSVV PRMWGGLTNP RELRAIADVV
EKYNAPMVKV TGGQRLDIFG IRKEDLPAVW ADLNAAGMVS GHAYGKSLRT VKTCVGSEWC
RFGTQDSTGL GVKLEQMTWG SWMPHKFKIA VSGCPRNCAE ATIKDFGVVC VDSGYELHVG
GNGGIKVRAT DLLCRVATEA EAMEVCAAFI QLYREQAWYL ERTAPWIERV GLEHVKAALF
DDPEAVATLA ARFRHSQQFM QDDPWAKRAR GADAELHQHL AEVRPFQMEN A
|
|---|
| |