| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2965 |
|---|
| Symbol | |
|---|
| ID | 3917400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3181951 |
|---|
| End bp | 3182730 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640445743 |
|---|
| Product | uroporphyrinogen-III C-methyltransferase |
|---|
| Protein accession | YP_498234 |
|---|
| Protein GI | 87200977 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0260792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACT TTCCGGCGGG AATGGTCTGG CTGGTCGGTG CGGGACCCGG CGATCCCGAA
CTGCTGACGC GCAAGGCCGA ACGGCTGATC GGCAGAGCCA GCGTCGTGTT CTTCGATGCT
CTTGTCGGCC GCGAGGTGCT CGACCTGGCC AGCCCGGGCG CGCGGCTCGT CGACGTGGGA
AAGCGCTCCG GCCGCCACTC GAAGGACCAG CGCACGATCG ATGCCCTGAT CGTCGAGGCC
GCGCTCTCCG GGGAACGGGT GGTGCGCCTG AAGGGCGGCG ATCCGTCGAT CTTCGGCCGC
GCAACCGAGG AACTGGAAGC GTGCCGATCC GCGGGCGTGG TGGTTGCCGT CTGTCCGGGC
GTGACGGCGG CCAGCGCGGC AGCTGCCGGG CTCTCGCGCT CGCTCACCCT GCGCGGACTG
GCGCGCAAGC TGGTCTTCGT TACCGCCCAT GCGCGCGCGG GCGATACGCT GGACCTTGAC
TGGGCAGCGC TGGCGGACCC GGGTGCGACG CTGGCGATCT ACATGGGCAA GTCAGCAGCC
GGCGCGATCG CTCGGGGGTT GCAGGGGACG GGCATGGCGG GCGAAACGCC GGTGGCGCTG
GTCGAGAATG CCAGCCTTCC CGACGAACGC CGGATCGTGA CGCGACTGGA CCTGCTGGAG
CTTGCCGCGC GGACGCTGGG CGACGGGCCG GCGCTGCTCC TGATCGGGGA AGCAATGCGT
ACGCCCGGTC GCCGTGCCGT GGCTGCGGCC GCGCAAGCCA TGGAAAGGGA GACGCCGTGA
|
|---|
| Protein sequence | MNDFPAGMVW LVGAGPGDPE LLTRKAERLI GRASVVFFDA LVGREVLDLA SPGARLVDVG
KRSGRHSKDQ RTIDALIVEA ALSGERVVRL KGGDPSIFGR ATEELEACRS AGVVVAVCPG
VTAASAAAAG LSRSLTLRGL ARKLVFVTAH ARAGDTLDLD WAALADPGAT LAIYMGKSAA
GAIARGLQGT GMAGETPVAL VENASLPDER RIVTRLDLLE LAARTLGDGP ALLLIGEAMR
TPGRRAVAAA AQAMERETP
|
|---|
| |