| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2950 |
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| Symbol | |
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| ID | 3917385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3167995 |
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| End bp | 3170157 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640445728 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_498219 |
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| Protein GI | 87200962 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA TGTCCGTATT GAAGGCCGCG CTTGCGGCTG GTGTCGCGAT GGGAGTGATG
CCGACGATGG CCTGGGCGCA GTCCGCCCCG GCAGAGGAAC AGGCCACGCC CGCGACCGAT
GGACTGGTCG TGATCGGCCA GCGCCAGCAG TATCGTGGCG ACGTGCCGCT TTCGGCCCTG
CCGCAGAGCG TGCAGGTGCT CGATTCCAAG ACTCTGCAGG ATCTCAACAT TACCCGCTTC
GATGCGGCGC TGGAACTGAC CAGCGGCATC GCGAAGCAGA ACAACTTCGG CGGTCTGTGG
GATGCGTTCG CGGTCCGCGG CTTTGCCGGC GACGAGAACT TCCCGTCGGG CTTTCTGGTC
AACGGCTTCA ACGGCGGTCG CGGCTACGGC GGCCCGCGCG ATGCCTCGAA CATCGAGAAG
ATCGAAGTCC TGAAGGGTCC CAACGGCGCC GTGTTCGGTC GTGGCGAGCC GGGCGGTACG
ATCAACATCA TCACCAAGAA GGCGCGCACC GACGAGACCT TCGGGTCGTT TTCGCTCCTC
GGCGGTAGCT GGAACAACTT CCGCGTCGAA GCCGACTACA ACCTTGCCAT CACCGACACG
CTCGCGGTCC GTCTCAACGG TGCGGTGCAG GACGGCGACA GCTTCCGCGA CACCGTTCAC
CAGACCAAGT ACGTCGCCTC GCCCTCGATC CTGTTCAAGC CCTCCAGCGA CACCAGCCTG
TCGTACGAGA TGGAATTCGT CGACAACAAG GTGCCGTTCG ACCGCGGCGT TCTGGCGATC
GGTGGCAAGC TTGGCGTCAT CCCCAACTCG CGCTTCCTTG GCGAGCCGGG CGACGGTCCG
ATCCGCGTGA AGGTGCTGGG CCACCAGCTC CAGCTCCAGC AGAAGATCGG CGGCGACTGG
TACTTCCTCG CCGGTGTCGG TTACCGCGAT ACCAGCTTCA ACGGCTATGG CACGCAGGCA
GAACTCGCCC TTGGCCGCCA GTCGCTCGAC AACGACGGCA CCAACCTGAC TCGCCAGCGC
ATCCTGCGCG ACTACAACAC CACCAACACC TCGGTGCGCG GCGAAATCTC TGGCAAGCTG
TACACCGGCC CGTTCACGCA CCACGTGCTG GTCGGGGCCG ACTGGGATCG CTTCCACATC
GACGTGCTGC AGAAGCGCTA CCGTCCGCCG AGCTATACGC CGGGCAGCGC GTTCACCGCC
GCGAACAATG CCATCAACGT GTTCGATCCG GTCTACGGGC AGCTCCCGAC GGTGACCGCC
GTGCAGCAGA ACACCGACGA AGTCCAAAAG GCCTACGGCA TCTACTTCCA GGACCAGATC
GACATCACCG ATCGCCTGAA GGTGCGCGTG GGTGGTCGAT TCGACCACTT CGACCAGACC
ATCCTGAACC GCACGACCAG CAAGCTGTCC AAGGTCACGT TCAAGCAGTT CAGCCCAACG
GCCGGCGCGC TGTTCAAGAT TACCGAGGAT CTTTCGATCT ACGGCGGTTA CGGCGAGGGC
TTCCGTCCGA ACAGCGGCGT GGACTTCTTC GGCAACTCCT TCGCGCCGGA ACTCAGCAAG
TCCTACGAGG TCGGCCTGCG CTTTGCCGCA CCTGGTGACG CCATCACCGC GTCGGTCGCT
GCCTTCACGA TGAAGAAGAA CAACATCCTG ACCGCCGACC CGAACCCCGA TCACACCGGG
TCCTCGATCG CCGGTGGCGC CGCGAAGTCT CGCGGCCTGG AGTTCGACGT CACCGCGAAC
CTGCCGGGCG ACATCTCGCT GATCGCCAGC TACGCCTATA TCGATGCGTT CTGGACCACG
GAATCGTCGG ACAAGGACTT CGGCCTGACG ATCCAGCCGG GCGACCGCCT GATCAACGTG
CCCAAGCATT CGGCCAACGT CGTCCTGACC AAGGGCTTCC TCATCGGCGG ACACCGCTTC
AGCTTCGGCG GCGGCGTCAA CTATGTTGGC AAGCGCCTGG GCGAAACGGC CACGACGTTC
GAATTGCCCG GCTACGTTCT CGCCCGCCTC ACCGCGAGCT ACGAACCCGC CGACAACGTC
AAGATCAACG CCGACGTGAC CAATCTGTTC GACAAGCAGT ACTACGCCGC GTCGTATTCG
AAGTTCTGGA TCAATCCGGG CGCGCCGCGC GCGTTCAATG TCCGGGCGAC CTTCTCGTTC
TGA
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| Protein sequence | MMKMSVLKAA LAAGVAMGVM PTMAWAQSAP AEEQATPATD GLVVIGQRQQ YRGDVPLSAL
PQSVQVLDSK TLQDLNITRF DAALELTSGI AKQNNFGGLW DAFAVRGFAG DENFPSGFLV
NGFNGGRGYG GPRDASNIEK IEVLKGPNGA VFGRGEPGGT INIITKKART DETFGSFSLL
GGSWNNFRVE ADYNLAITDT LAVRLNGAVQ DGDSFRDTVH QTKYVASPSI LFKPSSDTSL
SYEMEFVDNK VPFDRGVLAI GGKLGVIPNS RFLGEPGDGP IRVKVLGHQL QLQQKIGGDW
YFLAGVGYRD TSFNGYGTQA ELALGRQSLD NDGTNLTRQR ILRDYNTTNT SVRGEISGKL
YTGPFTHHVL VGADWDRFHI DVLQKRYRPP SYTPGSAFTA ANNAINVFDP VYGQLPTVTA
VQQNTDEVQK AYGIYFQDQI DITDRLKVRV GGRFDHFDQT ILNRTTSKLS KVTFKQFSPT
AGALFKITED LSIYGGYGEG FRPNSGVDFF GNSFAPELSK SYEVGLRFAA PGDAITASVA
AFTMKKNNIL TADPNPDHTG SSIAGGAAKS RGLEFDVTAN LPGDISLIAS YAYIDAFWTT
ESSDKDFGLT IQPGDRLINV PKHSANVVLT KGFLIGGHRF SFGGGVNYVG KRLGETATTF
ELPGYVLARL TASYEPADNV KINADVTNLF DKQYYAASYS KFWINPGAPR AFNVRATFSF
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