Gene Saro_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2944 
Symbol 
ID3917379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3161351 
End bp3162340 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID640445722 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_498213 
Protein GI87200956 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTT CGGCTACATC CGCGCCGAAA TCCGCTCTCG TCGGCGTGCT GCCGCTGATC 
GGCAAGCGCA TCGGTTCTGC GTTGCTTACG CTGCTGCTGG TCTCGGCCGT GGTCTTCGCC 
ATTTCGGGGC TCTTGCCGGG CGATGCCGCG CAGGAGACGC TGGGCCAAAG CGCCACGCCC 
GAACAGGTTG CCGCGCTGCG CCACGAAATG GGCCTCGATC GCCCCGCGCT GACCAGATAC 
GTGGACTGGC TCGGGGGCAT CCTGCAAGGC GATCCAGGCC AGTCGCTCGT CGCGAACATG 
CCCGTGCGCG AGGTGATTTC GGAACGCCTG CCCAATTCGC TGATGCTGGC GGGCTTCACC 
GCCCTCGTAT CGGTGCCGTT GGCGCTGGCG ATCGGCGTTG CTTCGGCGAT CAATCGTGGC 
GGACGGCTGG ATCGCGTACT CAACGTGATG ACGCTGTCCG CCGTCGCGGT GCCGGAATTT 
CTCGTTGCGA CCCTCGGTGT GCTGGTGTTT TCGGTCAAGC TGCTGTGGCT GCCCTCGATC 
GCACTGGTAA GCGAGGAAGC CAGCCTGTGG GACACGGTGC GTTCCTGCGC CTTGCCGGTG 
CTGTCGCTCT CGGTCGTGGT GATTGCACAG ATGGCGCGGA TGACGCGCGC GGCGGTCGCC 
GACCAGCTTG ACCGTCCCTA CGTCGAGATG GCGCGCTTGA AGGGCGTGCC GTTCCGCCGC 
CTCGTGCTGT TTCACGTCCT GCCAAATGCC GTTGGCCCCA TCGTCAACGC CGTTGCCCTT 
TCGCTATCCT ACCTGCTGGG CGGGGCGATA ATCGTCGAGA CGATCTTCAA TTTCCCCGGC 
CTTGCCAGTC TCATGGTCAA TGCCGTTACC AGCCGCGACA TGCCGCTGCT CCAGGCCTGC 
GCAATGATTT TCTGTGCGAT CTATCTTGCG CTGGTGCTGC TGGCCGACGT CGTGGCGATC 
CTCGCCAATC CAAGGCTGCG TGCGCAATGA
 
Protein sequence
MAGSATSAPK SALVGVLPLI GKRIGSALLT LLLVSAVVFA ISGLLPGDAA QETLGQSATP 
EQVAALRHEM GLDRPALTRY VDWLGGILQG DPGQSLVANM PVREVISERL PNSLMLAGFT 
ALVSVPLALA IGVASAINRG GRLDRVLNVM TLSAVAVPEF LVATLGVLVF SVKLLWLPSI 
ALVSEEASLW DTVRSCALPV LSLSVVVIAQ MARMTRAAVA DQLDRPYVEM ARLKGVPFRR 
LVLFHVLPNA VGPIVNAVAL SLSYLLGGAI IVETIFNFPG LASLMVNAVT SRDMPLLQAC 
AMIFCAIYLA LVLLADVVAI LANPRLRAQ