| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2909 |
|---|
| Symbol | |
|---|
| ID | 3915548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 3126810 |
|---|
| End bp | 3129053 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640445687 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_498178 |
|---|
| Protein GI | 87200921 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGT TTTCAGTTTC CAAGGTCGCC TTGCTGGCGG CAACGATGGC CCCTGCCCTG
CTGCCTGCCG CAGCACGCGC CGAAGGCACC GCCGCGCCCG CCGCAACCGC GCCTGCCACC
CCCATGTCGA ACAGGGACTG GTGGCCCAAT CGCCTCGACC TTTCGCCGCT TCGCCAGCAC
GGCGTTGAAT CGAACCCGAT GGGCGGCAAG TTCAACTATG CCGAGGAATT CAAGACTCTC
GACCTCGCCG CGGTGAAGAA GGACATCGAG GCGCTGATGA CGACCTCGCA GGACTGGTGG
CCGGCCGACT ACGGCCACTA CGGTCCGTTC TTCATCCGGA TGGCATGGCA CAGCGCCGGC
ACCTATCGCA CCGCCGACGG GCGCGGCGGT GCCGGCGGCG GCCAGCAGCG CTTCGAACCG
CTCAACTCCT GGCCCGACAA CGTCAACCTC GACAAGGCCC GCCGTCTGCT CTGGCCGATC
AAGCAGAAGT ACGGTCGCAA GATCTCGTGG GCGGACCTCA TGGTGTTGAC TGGCAACGTC
GCGCTCGAAT CGATGGGCTT CAAGACCTTC GGGTTCGCGG GTGGCCGCGC CGACGACTGG
GAGGCCGATC AGGTCTTCTG GGGGCCAGAG AACAAGTGGC TGGCCGACCA GCGCTACCAC
GGCGACCGGA AGCTCCAGAA CCCGCTCGCA GCGGTGCAAA TGGGCCTCAT CTACGTCAAT
CCGGAAGGCC CGAACGGCAA TCCCGACCCG CTGCTCGCGG CAAAGGACAT CCGCGAGACG
TTCGGCCGCA TGGCCATGAA CGACGAAGAG ACCGTCGCCC TGATCGCCGG GGGCCACACC
TTCGGCAAGG CGCACGGCGC GCGCAAGCCG GAAGGCTGCG TGGGCGTCGA TCCGGCGGCC
GGAGCCGTCG AGGACCAGGG TCTGGGCTGG AACAACAAGT GCGGCAAGGG CAATGCCGAA
GATACCGTGA GCAGCGGCCT CGAAGGCGCG TGGACCGCCA ACCCGATCGC CTGGACCACG
CAGTACCTCG ACAACCTCTA TGCGTTCGAA TGGGTCCAGA CCCGCAGCCC GGCTGGCGCG
ATCCAGTGGG TGCCCAAGGA GGACGCGACC TTCGTCCCCG ACGCACACGT CAAGGACAAG
TTGCACAAGC CGATCATGTT CACCACCGAT CTCGCGCTGA AGACGGACCC GGCCTATCGC
AAGATCACCA CGAAGTTCCG CCAGAACCCC GACGCCTTCG CCGATGCCTT CGCCCGCGCA
TGGTTCAAGC TGACCCACCG CGACATGGGC CCGCGCTGGC GCTATCTCGG CGCGATGGTG
CCTGCCGAGG AACTGATCTG GCAGGACCCC GTCCCCAAGG CCACCTACGC CATGATCGAC
GCGGCCGACG TCTCGGCGCT CAAGGGGCGC ATCCTCGCCA CCGGGCTCAC CGGGCCTGAA
CTGGTGCGCG CGGCCTGGGC CTCGGCGGCA AGCTTCCGCG GCACCGACAT GCGCGGCGGC
ACCGATGGCG GACGCATCCG CCTCGCTCCG CAGAAGGACT GGGCGGCCAA CAATCCGGCG
GAACTCGCAA GGGTCCTGAA GGCGCTCGAA GGCGTCGCGA CCGAGTTCAA CCGCGCCGCA
AAGGACGGCA AGAAGGTCTC CGTGGCCAAT CTCGTCGTGC TGGGCGGCAA TGCCGCAATA
GAACAGGCCG CGGCAAAGGC CGGCGTCACG GTCGAGGTGC CGTTCACGCC CGGCCGCACC
GACGCGAGCC AAGCCCAGAC CGATGTCGCG TCGTTCGAGT TCCTGAAGCC TGCCGCCGAT
GGCTTCCGCA ACTATTACGA TGCGTCCGCC AACCGCCTTT CGCCTTCGGA AATGCTGGTC
GAACGCGCAA ATCTGCTGAC GCTTTCGGTG CCGGAAATGA CCGTGCTGGT CGGCGGCTTG
CGCGCGCTCG ATGCCAATGC CGGCGGGGCC AGGCACGGGG TCTTCACCGA TCGTCCGGGC
ACGCTCAGCA ACGACTTCTT CGTCAACCTG CTGGGCATGG AGACGAAGTG GCAGAAGGCG
GCGACCGACG GCGTCTATGA AGGGCTTGAT CGCAAGACCG GCAAGACCAG GTGGACGGCC
ACCCCCGTCG ACCTCGTGTT CGGTTCCAAC TCCGAACTGC GGGCGGTCTC TGAAGTCTAC
GGGTCGGCCG ATGCCAACGC GAAGTTCGTC AACGACTTCG TCGCGGCCTG GACCAAGGTC
ATGAACCTCG GTCGCCCGTC ATAA
|
|---|
| Protein sequence | MRKFSVSKVA LLAATMAPAL LPAAARAEGT AAPAATAPAT PMSNRDWWPN RLDLSPLRQH
GVESNPMGGK FNYAEEFKTL DLAAVKKDIE ALMTTSQDWW PADYGHYGPF FIRMAWHSAG
TYRTADGRGG AGGGQQRFEP LNSWPDNVNL DKARRLLWPI KQKYGRKISW ADLMVLTGNV
ALESMGFKTF GFAGGRADDW EADQVFWGPE NKWLADQRYH GDRKLQNPLA AVQMGLIYVN
PEGPNGNPDP LLAAKDIRET FGRMAMNDEE TVALIAGGHT FGKAHGARKP EGCVGVDPAA
GAVEDQGLGW NNKCGKGNAE DTVSSGLEGA WTANPIAWTT QYLDNLYAFE WVQTRSPAGA
IQWVPKEDAT FVPDAHVKDK LHKPIMFTTD LALKTDPAYR KITTKFRQNP DAFADAFARA
WFKLTHRDMG PRWRYLGAMV PAEELIWQDP VPKATYAMID AADVSALKGR ILATGLTGPE
LVRAAWASAA SFRGTDMRGG TDGGRIRLAP QKDWAANNPA ELARVLKALE GVATEFNRAA
KDGKKVSVAN LVVLGGNAAI EQAAAKAGVT VEVPFTPGRT DASQAQTDVA SFEFLKPAAD
GFRNYYDASA NRLSPSEMLV ERANLLTLSV PEMTVLVGGL RALDANAGGA RHGVFTDRPG
TLSNDFFVNL LGMETKWQKA ATDGVYEGLD RKTGKTRWTA TPVDLVFGSN SELRAVSEVY
GSADANAKFV NDFVAAWTKV MNLGRPS
|
|---|
| |