Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2906 |
Symbol | |
ID | 3915545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3122465 |
End bp | 3124042 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640445684 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_498175 |
Protein GI | 87200918 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGAGGA GTGACGAGGC CCCGCTTCCC AGGCCCCGGT TGAGGCGTCT GCCGCGTATC CGCGGCGTTT CGCTCACCAC CCGCATCCTT TTCGTCAACG TGATAGCGCT GGCGCTGCTC GCGGGTGGCT TCTTCTATCT CGACAGCTAT CGCACCCAGC TTATCGACGA ACGCTTCAAG CTCGCCCGGG CCGAAGCCGA GATCGCGGCA GACGCGCTTG ACGAAACGCC GATGGCCGAA CGGCGGCGCC TGCTGGTCCG GATCGGGCAG GAGCAGGTGC TGCGCCTGCG GCTCTACGAC GCCGAAAGCC GGCTGGAGGC GGACAGCTTC GCGCTTGCCC CGCCGTCGTT CGCGCTCGTC GATCCGGAAA GCGAGCCGTG GTACCAGAAG GCGGCGCGGC TGCTCGACCG GGGCGTGGAC TTCATCGTCA ATGCGCCCAG TGTCGAGCGT TACAGCGACA CCGCCGAACA GCCCGCCGGG CAATGGCCCG AAATTCGCGC CGCGCGGGTA TCGGGGCAAA CCGAGGTGTT CCTCCGCTAT GCGCCAGACC GCACGCCGGT CATCACTGCC GCGACGCCGG TGGGGACGAG GGGCGAAGTC CTGCTCACGC TGCGCAACGC GCTCGACATC ACCCAGTCGG TCCGCGATGC CCGCCAGACG CTGGTCATCA TCATCGGCAT TGCGCTGTTG CTGTCGGTCC AGCTTTCGCT GTTCCTCGCG CGAACGATCG TCCAGCCGCT GCGGGCGCTG GTGCGCGCGG CGGTGCGCGT CCGTCTCGGG CGGGAGCGCG AGGTCGTGGT GCCGCGACTT CCGGATCGCG GCGACGAGAT CGGGCTTCTG GCACGCGCGG TGTCGGACAT GACGACCGCG CTGCGCCAGC GCATCGACGC GGTCGAGATG TTCGCGGCGG ATGTGGCGCA CGAACTGAAG AACCCGCTCG CTTCGCTGTC GAGTGCGCTG GAGACGATGG AGCGGGTGGA GGACCCCGCA CTTCGCCGCC AGCTCGCGGG GATCGCGGCG CACGACGTGC AGCGCATCGA CCGCCTCATC ACCGAAATCG CCGACGCGAG CCGCATCGAC GCCGAACTCA GCCGCGCGAC CTTCGTCCCG CTGGACGTAG CCGCGCTGGC CTCGCAGGTG GTGGGCGCGC GCGACGTGCG TGCCAATGTC TCGACGCCCA TCCGCTTCTC CAATGGCGGT GGCGACACGG TCGTTGCGGG CGATGCCGCG CGGCTGGAGC GCGTGCTGGA GAACCTGCTC GACAATGCGG TGTCCTTTTC GCCACCCGGT GGCGAGGTCG AAGTCGTCGC CTGGGGCGAT GGCGAGGCCG CGCACCTTTC GGTGTCCGAC GAAGGGCCGG GCATCCCGGC GGGAGAGCGC GACAAGGTAT TTGAGCGGTT CCATTCGGTG CGCCCGGAAG AGGAAGCGTT CGGGGCGCAT AGCGGCCTCG GTCTGGCCAT CGCGCGGACC ATAGCCGAAG CTCACGATGG CGCGCTCGTG ATCGGCGACC GTCCGGACGG AAAGGCGGGG GCCTACCTCG TGCTCAGCCT TCCCCTGCTC GCGGAAGAAA GCGAATGA
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Protein sequence | MPRSDEAPLP RPRLRRLPRI RGVSLTTRIL FVNVIALALL AGGFFYLDSY RTQLIDERFK LARAEAEIAA DALDETPMAE RRRLLVRIGQ EQVLRLRLYD AESRLEADSF ALAPPSFALV DPESEPWYQK AARLLDRGVD FIVNAPSVER YSDTAEQPAG QWPEIRAARV SGQTEVFLRY APDRTPVITA ATPVGTRGEV LLTLRNALDI TQSVRDARQT LVIIIGIALL LSVQLSLFLA RTIVQPLRAL VRAAVRVRLG REREVVVPRL PDRGDEIGLL ARAVSDMTTA LRQRIDAVEM FAADVAHELK NPLASLSSAL ETMERVEDPA LRRQLAGIAA HDVQRIDRLI TEIADASRID AELSRATFVP LDVAALASQV VGARDVRANV STPIRFSNGG GDTVVAGDAA RLERVLENLL DNAVSFSPPG GEVEVVAWGD GEAAHLSVSD EGPGIPAGER DKVFERFHSV RPEEEAFGAH SGLGLAIART IAEAHDGALV IGDRPDGKAG AYLVLSLPLL AEESE
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