Gene Saro_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2906 
Symbol 
ID3915545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3122465 
End bp3124042 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content69% 
IMG OID640445684 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_498175 
Protein GI87200918 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAGGA GTGACGAGGC CCCGCTTCCC AGGCCCCGGT TGAGGCGTCT GCCGCGTATC 
CGCGGCGTTT CGCTCACCAC CCGCATCCTT TTCGTCAACG TGATAGCGCT GGCGCTGCTC
GCGGGTGGCT TCTTCTATCT CGACAGCTAT CGCACCCAGC TTATCGACGA ACGCTTCAAG
CTCGCCCGGG CCGAAGCCGA GATCGCGGCA GACGCGCTTG ACGAAACGCC GATGGCCGAA
CGGCGGCGCC TGCTGGTCCG GATCGGGCAG GAGCAGGTGC TGCGCCTGCG GCTCTACGAC
GCCGAAAGCC GGCTGGAGGC GGACAGCTTC GCGCTTGCCC CGCCGTCGTT CGCGCTCGTC
GATCCGGAAA GCGAGCCGTG GTACCAGAAG GCGGCGCGGC TGCTCGACCG GGGCGTGGAC
TTCATCGTCA ATGCGCCCAG TGTCGAGCGT TACAGCGACA CCGCCGAACA GCCCGCCGGG
CAATGGCCCG AAATTCGCGC CGCGCGGGTA TCGGGGCAAA CCGAGGTGTT CCTCCGCTAT
GCGCCAGACC GCACGCCGGT CATCACTGCC GCGACGCCGG TGGGGACGAG GGGCGAAGTC
CTGCTCACGC TGCGCAACGC GCTCGACATC ACCCAGTCGG TCCGCGATGC CCGCCAGACG
CTGGTCATCA TCATCGGCAT TGCGCTGTTG CTGTCGGTCC AGCTTTCGCT GTTCCTCGCG
CGAACGATCG TCCAGCCGCT GCGGGCGCTG GTGCGCGCGG CGGTGCGCGT CCGTCTCGGG
CGGGAGCGCG AGGTCGTGGT GCCGCGACTT CCGGATCGCG GCGACGAGAT CGGGCTTCTG
GCACGCGCGG TGTCGGACAT GACGACCGCG CTGCGCCAGC GCATCGACGC GGTCGAGATG
TTCGCGGCGG ATGTGGCGCA CGAACTGAAG AACCCGCTCG CTTCGCTGTC GAGTGCGCTG
GAGACGATGG AGCGGGTGGA GGACCCCGCA CTTCGCCGCC AGCTCGCGGG GATCGCGGCG
CACGACGTGC AGCGCATCGA CCGCCTCATC ACCGAAATCG CCGACGCGAG CCGCATCGAC
GCCGAACTCA GCCGCGCGAC CTTCGTCCCG CTGGACGTAG CCGCGCTGGC CTCGCAGGTG
GTGGGCGCGC GCGACGTGCG TGCCAATGTC TCGACGCCCA TCCGCTTCTC CAATGGCGGT
GGCGACACGG TCGTTGCGGG CGATGCCGCG CGGCTGGAGC GCGTGCTGGA GAACCTGCTC
GACAATGCGG TGTCCTTTTC GCCACCCGGT GGCGAGGTCG AAGTCGTCGC CTGGGGCGAT
GGCGAGGCCG CGCACCTTTC GGTGTCCGAC GAAGGGCCGG GCATCCCGGC GGGAGAGCGC
GACAAGGTAT TTGAGCGGTT CCATTCGGTG CGCCCGGAAG AGGAAGCGTT CGGGGCGCAT
AGCGGCCTCG GTCTGGCCAT CGCGCGGACC ATAGCCGAAG CTCACGATGG CGCGCTCGTG
ATCGGCGACC GTCCGGACGG AAAGGCGGGG GCCTACCTCG TGCTCAGCCT TCCCCTGCTC
GCGGAAGAAA GCGAATGA
 
Protein sequence
MPRSDEAPLP RPRLRRLPRI RGVSLTTRIL FVNVIALALL AGGFFYLDSY RTQLIDERFK 
LARAEAEIAA DALDETPMAE RRRLLVRIGQ EQVLRLRLYD AESRLEADSF ALAPPSFALV
DPESEPWYQK AARLLDRGVD FIVNAPSVER YSDTAEQPAG QWPEIRAARV SGQTEVFLRY
APDRTPVITA ATPVGTRGEV LLTLRNALDI TQSVRDARQT LVIIIGIALL LSVQLSLFLA
RTIVQPLRAL VRAAVRVRLG REREVVVPRL PDRGDEIGLL ARAVSDMTTA LRQRIDAVEM
FAADVAHELK NPLASLSSAL ETMERVEDPA LRRQLAGIAA HDVQRIDRLI TEIADASRID
AELSRATFVP LDVAALASQV VGARDVRANV STPIRFSNGG GDTVVAGDAA RLERVLENLL
DNAVSFSPPG GEVEVVAWGD GEAAHLSVSD EGPGIPAGER DKVFERFHSV RPEEEAFGAH
SGLGLAIART IAEAHDGALV IGDRPDGKAG AYLVLSLPLL AEESE