Gene Saro_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2894 
Symbol 
ID3915533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3113845 
End bp3114750 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID640445673 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_498164 
Protein GI87200907 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCA TCTTCATGGG GACGCCCGAT TTCGCGGTGC CGACGCTGGA GGCGCTCGTC 
GCGGCCGGGC ACGATGTGGT CGCCGCCTAC AGCCAGCCGC CGCGTCCGGC GGGACGGGGC
AAGAAGCTGC AACCCTCGCC CGTCCATCTG GCCGCCGAAG CCCACGGGAT CGACGTGCGC
ACGCCCGTCT CTCTCAAAGG GGCGGATGAG CAGACCACGC TTGCCGCGTT CGATGCGGAT
GTGGCGGTCG TCGCGGCCTA TGGCCTGATC CTGCCGCAGG CCGTGCTGGA TGCGCCGCGC
CTCGGCTGCC TCAACGTCCA CGGCTCGCTC CTGCCGCGTT GGCGCGGCGC CGCGCCGGTC
CAGCGCGCGA TCCTCGCGGG CGACGAGATG ACCGGCGTCA CCATCATGCA GATGGAGCGG
GGACTCGATA CCGGGCCGAT GCTGGCGAGG ATCGAAACTC CGGTCGACGG CAAGACCGCG
GGCGATCTCA CCGCCGAACT TGCGGTGAAA GGTGCCGCGC TGATGGTGCA GGTGCTGGCC
GACCTGGCGA GCTATCCTGC GGTGGTGCAG CCGGAGCAGG GCGTGACCTA CGCCCACAAG
ATCGACAAGG CGGAGAGCCG GTTGGACTTC ACCCGCGATG CGGTGGACGT GGAACGGCAA
GTCCGCGCCT TTTCCCCGGC TCCCGGTGCC TTCTTCGAAC TTGAAGGCGA ACGCTACCGC
GTGCTGGCGG CCGAAGTCCT CGGCGTGGCG GGCGAACCGG GCGTAACGGT CGACGACGTG
CTTGCCATTG CCTGCGGCAC CGGCGCGATC CGACCGACCC TGATCCAGCG CGCGGGTCGC
CCGGCCATGG ACACTGCCTC GCTGCTGCGC GGGCGCGCCA TTCCCGGGGG AACGCGTCTT
GGTTGA
 
Protein sequence
MRIIFMGTPD FAVPTLEALV AAGHDVVAAY SQPPRPAGRG KKLQPSPVHL AAEAHGIDVR 
TPVSLKGADE QTTLAAFDAD VAVVAAYGLI LPQAVLDAPR LGCLNVHGSL LPRWRGAAPV
QRAILAGDEM TGVTIMQMER GLDTGPMLAR IETPVDGKTA GDLTAELAVK GAALMVQVLA
DLASYPAVVQ PEQGVTYAHK IDKAESRLDF TRDAVDVERQ VRAFSPAPGA FFELEGERYR
VLAAEVLGVA GEPGVTVDDV LAIACGTGAI RPTLIQRAGR PAMDTASLLR GRAIPGGTRL
G