| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2878 |
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| Symbol | |
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| ID | 3915517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3100898 |
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| End bp | 3103081 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445657 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_498148 |
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| Protein GI | 87200891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCC AGCTTCTCGC CACCCTGTTC CTTGGCCTCG CCGCCTGCTC CCTCGGCGGC
GCGACTGTCC TGACCGAGGG CGCCGGACGC GAGTGGCCCG GCCCGGGCGG TGACGCCGGC
AAGACGCATC ACTCGCGCCT GACCGCCATC AACGCGGAGA ACGTCGGTCG GCTCGGCCTT
GCGTGGCAAG TCGAACTTGG CACCCTGCGC GGGCAGGAGG CGACCCCGGT CGTGGTGGAC
GGCGTGCTCT ACACCTCGGG CACCACGGGC CGCGCCTATG CGTTCGATGC GGCGACCGGC
AAGGAGCTGT GGCGGTTCGA GCCCGAGGTC GACATGCAGG TCAACCGCAC GGTCTGCTGC
GACATGGTCA ACCGTGGCGT CGCGGTGGGG CGCGGCAAGG TCTTCGTCGC CAGTCTCGAT
GGGTGGATGT ACGCACTCGA TGCCCGCACC GGCGCGGTCG TCTGGAAGAG CGACTTCATC
GAGAACCGAG CCAAGGGCGA CAATTCCACC GGCGCTCCCG AAATCGCGGG CGATGTCGTC
GTCATCGGCA TGGGCGGCGC GGAGTACGAC GTGCGCGGCT ATGTCACGGC GCTCGATCTC
GATACCGGAA AGCTGCGCTG GCGTTGGCAC GTGGTGCCCC GCGATCCCAA GCTGGGGCCG
CAGGAAACGC CCGAACTCGA AGCCGCGCTG AAGACTTGGG ACCCGAACAG CCGCTGGGAC
ATCGGCGGCG GTGGCAGCCC GTGGGATGCG ATCAACTACG ACCCCGAAAC CGGCCTGGTC
CTTGTCGGCA CCGGCAATGG CGGGCCTTAC GCCACGTCCA AGCGCTCGCC TGCGGGGGGC
GACAACCTCT ACCTCGCCAG CCTCGTCGCG CTCGATCCGA AGACCGGGCG GATGAAGTGG
CACTACCAGG AAACGCCGGG CGACAACTGG GACTTCACCG CCACCCAGCC GATGATCTTC
ACCCGCATGA AGATCGACGG CGAGGACCGG CCAGTCGTGC TCCACGCGCC GAAGAACGGC
TATCTCTACA TTCTCGACCG GCGCGACGGA AAACTGCTGC GCGCCAATCC CATCGTCCGC
ACCAACTGGG CCAAGGGCAT CGATCCCGGG ACCGGCCGCC CGATCCTCGA TCCCGCGGCC
GCCGACTATA CCACCGGTCC CAAGATCGTG TTCCCGGCCA CGACCGGCGC ACGCAACTGG
CACCCCGCCA GCTACGATCC AGCGACCGGG CTCTACATCG GCGCGGTGCT CGACATGGGC
AATCTCATCT TCATGACGCC GGGGGCCAAG CCGCTCAAGG CGCGCGGGCT CAACAACGAT
GCCGCGCTCA TCTTCACGCC GGACGTCAAG GAAGCGCTTG CCGCCTTCCC GCCTGAATTC
GGCGATGCCG TGCGCAAGTT GCCTGCCTAT CAGGAGGCGC TGAAGCAGCC TGCCACCGCG
CAGATCCGCG CCATCGATCC GCTAACCGGG AAGACCGTCT GGGCGGCCGA TACCGCCGGC
TGGCAGGATC GCGGCGGCGT GCTGACCACG TCTTCGGGCC TTACCATCCA TGGCGGCGTC
ACCGGCAAGC TCTTCGTGCG CGATACGAAA ACCGGCAAGC TCCTGAAGGA AATAGACACC
GGCACTCCGA TCATGGCCGC GCCGATGACT TACGAGGTTG GCGGCGTGCA GTACATCGCC
GTCATGGCCG GGTGGGGCGG GGGCGGCTAT CCCTTCGTCC CGCGCTATTC CGCAGCCTAT
ACGCGCGGCA ACATGAACCG GCTGCTGGTG TTCAAGGTGG GGGGCGGCAA GGTGCCGTTG
CCGGACCTGC TCCCGCCGCT GGAAGTGGCG CCGGAACCGC CGGCACAGGC CGCGGGCGTG
ACGGCGGCGA CCATCGCGCG CGGGCAGGGC CTGTTCTTCG GCAATTGCGC GATCTGTCAC
GCCAACCAGC CCCGCTCGAT CACGCCGGAC TTGCGCCGGA TGCAGCCTGC CACGCACGAG
ATGTTCCGCG AGATCGTGCT CGAAGGCCTG CTCACGCCCA ATGGCATGCC GCGCTGGAAC
GACATCCTCT CGACCGACGA TGCCGACGCG ATCCACGCCT ACCTGATCGA CCTCCAGGGC
AAGACGCGCG CGGACGAACT GGCCAAGCAG AAGGCCGGCA AGCCGCTCGA TGGGCCTAGT
CTGACGATCC TGAGCAATTA CTGA
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| Protein sequence | MMRQLLATLF LGLAACSLGG ATVLTEGAGR EWPGPGGDAG KTHHSRLTAI NAENVGRLGL
AWQVELGTLR GQEATPVVVD GVLYTSGTTG RAYAFDAATG KELWRFEPEV DMQVNRTVCC
DMVNRGVAVG RGKVFVASLD GWMYALDART GAVVWKSDFI ENRAKGDNST GAPEIAGDVV
VIGMGGAEYD VRGYVTALDL DTGKLRWRWH VVPRDPKLGP QETPELEAAL KTWDPNSRWD
IGGGGSPWDA INYDPETGLV LVGTGNGGPY ATSKRSPAGG DNLYLASLVA LDPKTGRMKW
HYQETPGDNW DFTATQPMIF TRMKIDGEDR PVVLHAPKNG YLYILDRRDG KLLRANPIVR
TNWAKGIDPG TGRPILDPAA ADYTTGPKIV FPATTGARNW HPASYDPATG LYIGAVLDMG
NLIFMTPGAK PLKARGLNND AALIFTPDVK EALAAFPPEF GDAVRKLPAY QEALKQPATA
QIRAIDPLTG KTVWAADTAG WQDRGGVLTT SSGLTIHGGV TGKLFVRDTK TGKLLKEIDT
GTPIMAAPMT YEVGGVQYIA VMAGWGGGGY PFVPRYSAAY TRGNMNRLLV FKVGGGKVPL
PDLLPPLEVA PEPPAQAAGV TAATIARGQG LFFGNCAICH ANQPRSITPD LRRMQPATHE
MFREIVLEGL LTPNGMPRWN DILSTDDADA IHAYLIDLQG KTRADELAKQ KAGKPLDGPS
LTILSNY
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