Gene Saro_2858 details

Gene Information

• Locus tag: Saro_2858
• ID: 3915497
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 3081734
• End bp: 3082357
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640445637
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_498128
• Protein GI: 87200871
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.650896
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACCG GGATCGTCAC CGAAGTCGGC AATATCCTCG CCATCGAGGA CAAGGGCGAC 
CGCCACGTCA CGATTTCCTG CGCGATGGAC CCGGCGAAGA TCGCCATCGG CGCCTCCATC 
GCATGTTCGG GCGTGTGCCT GACTGTGGTG GACAAGGGCG GCGTGGCCGG CGAAGGCTGG 
TTCGCGGTGG ACGTCTCGGG CGAGACGGTG AGCCGCACCG CGCCGGAACA GTGGACGGTG 
GGCGCGCCTC TGAACCTCGA ACCCGCGCTG AAGCTCGGCG ATGAACTGGG CGGCCACATC 
GTGACCGGCC ATGTCGACGC GGTGGGCGAA GTGGTGGGGG TGTGTCCGGA AGGCGCATCG 
CTGAAATTCG GCATTTCCGC ACCGAAGGAA CTTGCACCCT ATATCGCGGC CAAGGGATCG 
ATCACGGTCA ACGGCGTTTC GCTGACGGTG AACGAGGTTG CGGATCAGCC TGACGGATCG 
TGCCACTTCG CGCTGAACAT CATTCCCCAC ACCGCGCAGG TGACGACGCT TGGCACGCTG 
GCGCCGGGGC ACAAGGTCAA TCTCGAGATC GACGTGCTGG CACGCTATCT CAAGCGTATG 
CAGAGCCTGG CTGCGCAGGG GTGA 

 

Protein sequence

MFTGIVTEVG NILAIEDKGD RHVTISCAMD PAKIAIGASI ACSGVCLTVV DKGGVAGEGW 
FAVDVSGETV SRTAPEQWTV GAPLNLEPAL KLGDELGGHI VTGHVDAVGE VVGVCPEGAS 
LKFGISAPKE LAPYIAAKGS ITVNGVSLTV NEVADQPDGS CHFALNIIPH TAQVTTLGTL 
APGHKVNLEI DVLARYLKRM QSLAAQG