Gene Saro_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2857 
Symbol 
ID3915496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3080750 
End bp3081721 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID640445636 
Productdiaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 
Protein accessionYP_498127 
Protein GI87200870 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCGACGACCT GCGCTGGCTT GACGCGGCAG CTAGCCTCGG CGCGCGCGGG 
CGACCTCTCA GCAGGCCCAA TCCGGCGGTC GGCGCGGTAA TCGTCAATGA CGGCGTGGTC 
GTTGGCCGTG GGTGGACGCA GGCCGGCGGA CGGCCCCATG CGGAGGCCGG TGCGCTGATG 
GCGGCGGGCG ACGCGGCGCA AGGGGCAACG CTCTACGTGA CGCTGGAACC CTGTGCCCAC 
GCCAGCGAAC GCGGGCCGTC GTGCACCTCG CTGGTGCTGA AGAGCGGGCT TGCGCGGGTG 
GTGATCGGCA TCGAGGACCC CGATCCTCGC ACGGCGGGTG GCGGAATTGC GGCGCTGCGC 
AGCGCGGGCA TCGCGGCCGA TGTGGTGCCG TCGGCAGCGG CGCGCGCTTC GCTGGTGGGT 
TATCTCGTGC GCACGGCAAC GGGGCGGCCG CACGTCACGC TCAAGCTTGC GACCTCGCTC 
GACGGGCGCA TCGCGCTGGC CGATGGCACG AGCAAGTGGA TCACCGGGCC GGAAGCGCGG 
GCGCACTGTC ATGTCGAGCG GGCGCGGGCG GACGCGATCC TCGTGGGCGG CGGCACCTTG 
CGCGCCGACG CGCCCCGGCT GGACGTGCGC CTGCCCGGGC TGGAAGCGCG CAGTCCGAAG 
CGAATGGTGC TGACGCGGGG CATCGCACCG GATGGCTGGA CGGGGGTGGC GGACATTGCC 
GCAACGGGGG CGTTCGGAGA CGCGCAGTAC CTGTTCGTCG AAGGCGGAGC GGGTGCGGCG 
GCGGCATTCC TGGCCGCAGA CATGGTCGAC CGCCTGCTGA TTTACCGCGC GCCGGTCGTC 
ATCGGCCAGG GATTGCCCTG CATCGGCGAC ATTGGCCTGG GATCGCTCGG CGAGGCGCAC 
GGGCGGTGGC GCAATGTGGA CCGGCGGACG CTTGGCAGCG ACAACCTCGA CGTATACGAG 
CGCATCGGTT GA
 
Protein sequence
MSAADDLRWL DAAASLGARG RPLSRPNPAV GAVIVNDGVV VGRGWTQAGG RPHAEAGALM 
AAGDAAQGAT LYVTLEPCAH ASERGPSCTS LVLKSGLARV VIGIEDPDPR TAGGGIAALR 
SAGIAADVVP SAAARASLVG YLVRTATGRP HVTLKLATSL DGRIALADGT SKWITGPEAR 
AHCHVERARA DAILVGGGTL RADAPRLDVR LPGLEARSPK RMVLTRGIAP DGWTGVADIA 
ATGAFGDAQY LFVEGGAGAA AAFLAADMVD RLLIYRAPVV IGQGLPCIGD IGLGSLGEAH 
GRWRNVDRRT LGSDNLDVYE RIG