Gene Saro_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2853 
Symbol 
ID3915492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3078375 
End bp3078989 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID640445632 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_498123 
Protein GI87200866 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.500235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC GCGCCATGCC CCACACCTTC AGATCGATCC TCGCCGCGGT TGCCGCAACC 
TGCACTTTTG CCCTGGCCGC CTGCAACGGC GCGCCGACGG AGAAACCGCC GCTTGAAGGC 
GCGGCAATCG GCGGCGATTT CACGCTGACG GGCAAGGACG GACGGCCCGT CCGCTGGTCG 
GACTTCGCGG GCAAGTATCG CGTGGTCTAC TTCGGATACA CCTTCTGCCC CGACGTGTGC 
CCGCTCGACC TGCAGAACAT CGCGCAAGGC CTGCGCCTGT TCGGCAAGGA CCACGCGGAC 
CTCGCGGCGA ACGTGGTGCC GGTATTCATC ACCATCGATC CGGAGCGCGA TACCGCCGAG 
GTCGTCGGCA AGTATGCGGC AAACTTCGGC CCGAAGGTCG TGGGCCTGAC GGGCACGCCC 
GCGCAGATCG CGGACGTCGC CAGGAAGTGG GCGGTGTTCT ACCAGAAGCG CGACGACGGA 
AAGCCCGAAG CCTACCTGAT GGACCACAGC CGCGCCGCAT ACCTGATGGG ACCGAAGGGC 
GACGCGATCG CGCTGCTGCC GGCGGAGCAG GACGCCAAGG CGGTAGCGGC CGAGCTTGCG 
AAGTGGGTAC ATTGA
 
Protein sequence
MNRRAMPHTF RSILAAVAAT CTFALAACNG APTEKPPLEG AAIGGDFTLT GKDGRPVRWS 
DFAGKYRVVY FGYTFCPDVC PLDLQNIAQG LRLFGKDHAD LAANVVPVFI TIDPERDTAE 
VVGKYAANFG PKVVGLTGTP AQIADVARKW AVFYQKRDDG KPEAYLMDHS RAAYLMGPKG 
DAIALLPAEQ DAKAVAAELA KWVH