Gene Saro_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2851 
Symbol 
ID3915490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3076998 
End bp3077651 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID640445630 
ProductRpsU-divergently transcribed 
Protein accessionYP_498121 
Protein GI87200864 
COG category[S] Function unknown 
COG ID[COG5590] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02396] rpsU-divergently transcribed protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.541917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG ACATCAGCCT CCAGGCCCTG CGCCTCCGCC TCGCGCCCGC CATCGCCGAT 
TCGGTCGCGT TCGACGGCTG GAAGGACGCC GCCGTCATGG CCGCCGCCCT TTCCGAAGGC 
GTGGACCCGG CGCTGGCGCG CTTCGCCTTC CAGGACGGGG CCATGAGCAT GATCGCGGCC 
TGGATTGCCC GCATCGATGC CGACATGGCC GCCGCGCTTC CCGCCGTGCA GCTTTCGAAC 
CTCCCGATCC GCGAACGTAT TCGCCGCTTG GTCCAGTTCC GGCTCGATGC GCTGGTCGGC 
CGGGAAGAGG CGCTGCGCCG CGCGCTCGCA ATCATGGCCA TGCCGCAGAA CGTGCCCGCC 
GCCACCCGCC TCGGCTGGTC CAGCGCCGAT GCCATGTGGC GCCTCGCCGG CGACACCGCG 
ACCGACTACA ACCATTATAC CAAGCGCATT ACGCTCGGCT CGATCTACGC CGCCACGCTT 
GCCTTCTTTG CGCAGGACAC CAGCGAGGAC CATGCCGATA CCCGCGCCTT CCTCGACCGG 
CGCATCGAGA ACGTCATGCA GTTCGAGAAG GCCAAGGCCA AGGTGCTGAA GCCACGGGAC 
GAAACCTTCT CCCTGTCGCG CCTGCTCGGC CGACTGCGCT ATCCTGCCGT CTGA
 
Protein sequence
MTQDISLQAL RLRLAPAIAD SVAFDGWKDA AVMAAALSEG VDPALARFAF QDGAMSMIAA 
WIARIDADMA AALPAVQLSN LPIRERIRRL VQFRLDALVG REEALRRALA IMAMPQNVPA 
ATRLGWSSAD AMWRLAGDTA TDYNHYTKRI TLGSIYAATL AFFAQDTSED HADTRAFLDR 
RIENVMQFEK AKAKVLKPRD ETFSLSRLLG RLRYPAV