Gene Saro_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2824 
Symbol 
ID3915463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3048765 
End bp3051344 
Gene Length2580 bp 
Protein Length859 aa 
Translation table11 
GC content67% 
IMG OID640445603 
ProductAAA ATPase, central region 
Protein accessionYP_498094 
Protein GI87200837 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.553525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCG AGAAATTCAC CGACCGCGCC AAGGGCTTCC TGCAGGCCGC GCAGACCGTT 
GCGATCCGCA TGAACCACCA GCGGATCACG CCCGACCACA TCCTCAAGGC CCTGCTGGAA
GACAGCGAGG GCATGGCCAG TGGCCTGATC CAGCGCGCGG GCGGCAATGC CGCCCTGGCG
CAGACCGAAG TCGACAAGGC GCTGGCGAAG ATCCCGGCGG TGTCCGGTTC GGGTGCCCAG
GCGACGCCGG GGCTCGACAA CGATGCCGTG CGCGTGCTCG ATTCCGCCGA GCAGATCGCG
GCCAAGTCCA ACGACAGCTT CGTCACCGTC GAGCGCATGC TCGTCGCGCT GACGCTCGCC
ACCACGACGT CGGCGGGGCA GGCGCTCAAG GCCGCGAACG TGACCGCGCA GGCGCTGGAA
GCGGCGATCA CGCAGCTTCG CGGCGGTCGC ACGGCGGACA GCGCGAGCGC GGAAAACGCC
TATGACGCGA TGAAGAAGTA CGCGCGCGAC CTGACCGAGG CGGCGCGCGA GGGCAAGCTC
GACCCGGTGA TCGGCCGTGA CGAGGAGATC CGCCGCACCG TGCAGATCCT CGCCCGGCGC
ACCAAGAACA ACCCGGCGCT GATCGGCGAG CCGGGCGTTG GCAAGACCGC GATCGCCGAA
GGCCTCGCGC TGCGCATCGC CAATGGCGAC GTGCCGGATT CGCTGAAGGA CCGCCGCCTC
ATGGCGCTCG ACATGGGTTC GCTCATTGCC GGTGCGAAGT ATCGCGGCGA GTTCGAGGAG
CGCCTGAAGG CCGTGCTCGA CGAGGTGAAG GGCGCGGAAG GCGAGATCAT CCTGTTCATC
GACGAGATGC ACACCCTGAT CGGGGCGGGC AAGAGCGAGG GCGCGATGGA CGCGGGCAAC
CTGCTCAAGC CAGCCCTGGC GCGCGGCGAA CTGCACTGCA TCGGCGCGAC GACGCTGGAC
GAGTACCAGA AGTACGTCGA GAAGGACCCC GCGCTGCAGC GGCGGTTCCA GCCGGTATTC
GTGGGCGAGC CGACCGTCGA GGACACGATC AGCATCCTGC GCGGCATCAA GGACAAGTAC
GAGCTGCACC ACGGCGTACG CATTGCCGAC AATGCGATCG TGGCTGCGGC GACGCTTTCG
AACCGCTACA TCTCCGACCG CTTCCTGCCC GACAAGGCCA TCGACCTGAT GGACGAGGCG
GCGAGCCGCA TCCGCATGGA AGTGGAAAGC AAGCCCGAGG AAATCGAGAA GCTCGACCGG
CGCATCATCC AGATGAAGAT CGAGGAGATG GCGCTTGCGA AGGAGACCGA CCAGGCGTCG
AAGGACCGGC TGGCGACCCT GCGCGAGGAA CTGGCGAACC AGGAGCAGCA ATCGGCCGAG
CTGACCACCC GCTGGCAGAA CGAGCGCGAC AAGATCGCCG CCGAGGGCAA GGTCAAGGAA
GCGCTGGATG CGGCGCGCAG CGAGCTGGAG GTGGCGCAGC GCAACGGCGA CCTGGCGAAG
GCCGGCGAGC TTGCCTATGG CCGCATTCCC GAGCTTGAGC GGCAACTGGC CGAAGCGCAG
GGCGTGAGCC AGAACGCGAT GCTGCGCGAG GAAGTGACCG CCGAGGACAT CGCCGCCGTC
GTCAGCAAGT GGACCGGCGT GCCCGTCGAC CGGATGATGG AAGGCGAGCG CGAGAAGCTG
CTGCACATGG AAGAGGCGCT GGGCAAGCGC GTGATTGGTC AGAAGGATGC GGTGCTGGCC
GTGTCCAAGG CCGTCCGCCG GGCCCGCGCG GGGCTTCAGG ACCCGAACCG TCCGCTGGGC
AGCTTCCTGT TCCTGGGCCC CACGGGCGTG GGCAAGACCG AGCTGACCAA GGCGCTGGCG
GGCTTCCTGT TCGACGACGA CAACGCGATG GTGCGCATCG ACATGTCCGA GTTCATGGAA
AAGCACTCCG TCAGCCGGCT GATCGGCGCG CCTCCGGGCT ATGTCGGTTA CGATGAAGGC
GGCGTTCTGA CCGAAGCAAT CCGCAGGCGG CCCTACCAGG TCGTGCTGTT CGACGAGGTC
GAGAAGGCGC ACTCGGACGT GTTCAATGTG CTGTTGCAGG TGCTCGACGA CGGGCGCCTG
ACCGATGGGC AGGGCCGCGT GGTGGACTTC ACCAACACGC TGATCATCCT GACCAGCAAC
CTCGGCAGCC AGTACCTCGC CAATCTGGAG GAGGGGCAGG ACGTGCAGAG CGTCGAGCCG
CAAGTCATGG ACGTCGTGCG CGCTCATTTC CGGCCCGAGT TCCTCAACCG TCTGGACGAG
ATCATCCTGT TCCACCGGCT GGGCCACGAA CACATGGCGC CGATCGTCGA CATCCAGGTG
GGCCGCGTGG CGAACCTGCT CAAGGATCGC AAGATCGTGC TCGACCTCAC CGACGCGGCC
AAGCGCTGGC TGGGACGGGT CGGCTACGAC CCGGTCTATG GCGCTCGTCC GTTGAAGCGG
GCCGTGCAGC GGTACTTGCA GGACCCGCTG GCCGAAAAGC TGCTGGGCGG CGAAGTGCCC
GATGGCAGCA CGGTGCGGAT CGACGAGGGC GATGGGGCCC TGAGCTTCGT GATCGCATGA
 
Protein sequence
MNLEKFTDRA KGFLQAAQTV AIRMNHQRIT PDHILKALLE DSEGMASGLI QRAGGNAALA 
QTEVDKALAK IPAVSGSGAQ ATPGLDNDAV RVLDSAEQIA AKSNDSFVTV ERMLVALTLA
TTTSAGQALK AANVTAQALE AAITQLRGGR TADSASAENA YDAMKKYARD LTEAAREGKL
DPVIGRDEEI RRTVQILARR TKNNPALIGE PGVGKTAIAE GLALRIANGD VPDSLKDRRL
MALDMGSLIA GAKYRGEFEE RLKAVLDEVK GAEGEIILFI DEMHTLIGAG KSEGAMDAGN
LLKPALARGE LHCIGATTLD EYQKYVEKDP ALQRRFQPVF VGEPTVEDTI SILRGIKDKY
ELHHGVRIAD NAIVAAATLS NRYISDRFLP DKAIDLMDEA ASRIRMEVES KPEEIEKLDR
RIIQMKIEEM ALAKETDQAS KDRLATLREE LANQEQQSAE LTTRWQNERD KIAAEGKVKE
ALDAARSELE VAQRNGDLAK AGELAYGRIP ELERQLAEAQ GVSQNAMLRE EVTAEDIAAV
VSKWTGVPVD RMMEGEREKL LHMEEALGKR VIGQKDAVLA VSKAVRRARA GLQDPNRPLG
SFLFLGPTGV GKTELTKALA GFLFDDDNAM VRIDMSEFME KHSVSRLIGA PPGYVGYDEG
GVLTEAIRRR PYQVVLFDEV EKAHSDVFNV LLQVLDDGRL TDGQGRVVDF TNTLIILTSN
LGSQYLANLE EGQDVQSVEP QVMDVVRAHF RPEFLNRLDE IILFHRLGHE HMAPIVDIQV
GRVANLLKDR KIVLDLTDAA KRWLGRVGYD PVYGARPLKR AVQRYLQDPL AEKLLGGEVP
DGSTVRIDEG DGALSFVIA