Gene Saro_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2787 
Symbol 
ID3916947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3007453 
End bp3008133 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID640445566 
Producturoporphyrinogen-III synthase 
Protein accessionYP_498057 
Protein GI87200800 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.270311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCC TGCCGCTCAT CGTCATCCGT CCCGAGCCCG GCAATGCCGC AACCATTGCC 
GCCGCGCGCG AACGGGGCCT TCATGCGATC GGCTACCCGC TCTTCCGGAT CGAGCCGACA 
CGGTGGAGCG TTGCCGAAGG GCGGTTCGAG GCGATCCTGG CGGGAAGCGC CAACATCTTC 
CGGCACGGCG GGCCGCAACT CGACGCACTG AAGCATCTCC CCGTCATCGC GGTGGGCGAA 
GCGACGGCCT CGGCCGCCCG CGCGGCAGGC TTCACCGTTG TCCGAACCGG CGAAGGCGGC 
CTGCAACCGG TGGTGGAGAC GCTTGCCCCC GGCACCTATC TGCGGCTCGC GGGCGAAGAC 
AGGGTCACGC TCGCCCCGCC GCCGGGCGTG CGAATCGAGA CGGCGGTCGT CTATGCGGCC 
CGCCCCGTCC CGCTTCCGGA CGAGCTGGTG GCGGTACTGG CGCGTCCAGC GGTCGTCCTG 
CTGCATTCCG GCGCAGCCGC GAAGCATTTC CGTCAGCAGT GTGAACGCAC TGGAATTACT 
CGGGAAAGCC TCTATCTAGC GTGCCTCGCC CCGCGCATCG CCGCACTTGC GGGCGATGGT 
TGGGGCGATC TGCGCATCGC TGACTCAAGA ACGGACTCCG ATCTGCTGGA ACTAGGCCGG 
CGAATGTGCC AGACCATGTG A
 
Protein sequence
MKLLPLIVIR PEPGNAATIA AARERGLHAI GYPLFRIEPT RWSVAEGRFE AILAGSANIF 
RHGGPQLDAL KHLPVIAVGE ATASAARAAG FTVVRTGEGG LQPVVETLAP GTYLRLAGED 
RVTLAPPPGV RIETAVVYAA RPVPLPDELV AVLARPAVVL LHSGAAAKHF RQQCERTGIT 
RESLYLACLA PRIAALAGDG WGDLRIADSR TDSDLLELGR RMCQTM