| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2780 |
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| Symbol | |
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| ID | 3916940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2999521 |
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| End bp | 3001764 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445559 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_498050 |
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| Protein GI | 87200793 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.768947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTGGA TCACTTCGGT TGCGCGGACG CTGTTTGTTC CCCATATCCG GCGCATGGCC
GAACTCGTTA TCCGCAGGGG ACTCGAAGAG CCCGACACCT CCGGCACCTT CGTGCCCCAC
CGCCCCGCAA GGCCGGACAA GGTGGAAGGC GGCAAGCGCT TCAGGATCGT GTCCGACTAC
CAGCCGGCGG GCGACCAGCC GACCGCCATC GCCGATCTCG TCGAAGGCAT CCGCGCGGAT
GACAAGACGC AGGTCCTGCT TGGCGTCACC GGTTCGGGCA AGACCTTCAC GATGGCGCAG
GTCATCGAGG CGACCCAGCG GCCCGCGCTG ATCCTTGCCC CCAACAAGAT CCTCGCCGCC
CAGCTCTATG GCGAGATGAA GAGCTTCTTC CCCGAAAACG CGGTCGAATA TTTCGTCTCC
TACTACGACT ACTACCAGCC GGAGGCCTAC GTGCCCCGGT CGGACACCTA CATCGAGAAG
GAAAGCTCGG TGAACGAGGC GATCGACCGG ATGCGCCACT CGGCCACCCG CGCCCTGCTG
GAGCGCGACG ACGTGATCAT CGTCGCCTCG GTCTCGTGCC TCTATGGCAT CGGCTCGGTC
GAAACCTACT CGGCCATGAT CTTCGACCTC AAGGTCGGCA CCACGGTCGA CAGCGGCGAG
ATCATCCGCA AGCTGGTGGC CCTGCAGTAC AAGCGCAACG ATGCCGCCTT CAGTCGCGGC
AACTTCCGCG TACGCGGCGA CAATCTCGAG ATCTTCCCCT CGCACTACGA AGACGTTGCC
TGGCGCATCT CGTTCTTCGG CGACGAGATC GAGCAGATCG TCGAGTTCGA TCCGCTGACC
GGCAAGGCGG GCACGAAGCT CACCGCGATC CGCGTCTACG CCAATTCGCA CTACGTGACG
CCCGGCCCGA CGATGAAGCA GGCCGCAGAC GCGATCCGCT TCGAACTGAC CGAGCGGCTC
AAGGAACTGG TCGCGGAAGG AAAGCTGCTC GAAGCGCAAC GGCTGGAACA GCGCACCAAC
TTCGACCTGG AAATGATCGC CGCGACCGGT TCATGCGCCG GGATCGAGAA CTACAGCCGT
TTCCTGACCG GCCGCCTCCC CGGCGAACCG CCCCCCACGC TGTTCGAATA CCTGCCGGAC
AATGCCCTGC TCTTCGTCGA CGAGAGCCAC CAGACGGTGC CGCAGATCGG CGCGATGGCG
CGAGGCGACC ATCGCCGCAA GCTTACGCTC GCCGAATACG GCTTCCGCCT GCCGAGCTGC
ATCGACAACC GACCGCTGCG CTTCAACGAA TGGGACGCGA TGCGCCCCCA GACGGTCGCG
GTCTCGGCCA CCCCGGGCGG CTGGGAAATG GAGCAGGCCG GCGGCGTCTT TGCCGAACAG
GTCATCCGCC CGACCGGCCT GATCGACCCG CCGGTGCTGA TCCGCCCGGT CGAGGACCAG
GTGCAGGACT GCATCAACGA GTGCCGCGAG ACCGCCGCCA AGGGCTATCG CACGCTCGTC
ACCACCCTGA CCAAGCGCAT GGCGGAAGAC CTGACCGAGT TCATGCACGA AGCGGGCCTG
CGCGTACGCT ACATGCACTC CGACGTCGAG ACGCTGGAGC GCATCGAGCT GATCCGCGAC
CTGCGGCTTG GCGTCTATGA CGTTCTCGTC GGCATCAACC TGCTGCGCGA AGGTCTCGAC
ATTCCCGAGT GCGGCCTCGT CTGCATCCTC GATGCCGACA AGGAGGGCTT CCTGCGCTCC
GAGACCTCGC TGATCCAGAC CATCGGCCGC GCCGCGCGCA ACGTCGATGG CCGCGTCATC
CTCTATGCCG ATCGCATGAC CGGCTCGATG GAACGCGCCA TCGCCGAAAC CGACCGCCGC
CGCGCAAAGC AGCAGGCCTA CAACGAAGAA CACGGCATCA CGCCGCAAAC GATCAAGCGC
AACATCCACG ACATCGTCGC GGATACCGCC AGCCGCGACG GCGTGGTCGT CGACACCGGC
GACGACGAGC GCAACAACCT CGTCGGCCAC AACCTGCGCG CCTATATCGA GGACCTCGAA
AAGCGCATGC GCGCGGCCGC AGCGGACCTC GAATTCGAGG AAGCCGGCCG CCTGCGCGAC
GAGATCAGGC GGCTCGAGGC CACCGAACTC GGCCTGCCTG AAGGCGAGCG GAAAGCGCCG
ATCGTGGGAC GCAGCAACGA AGGCAAGCCG GGTACGCGCA AGACGCGCTA CGGGAAGTCA
CAGAAGACGA AGTGGGGGAA GTAG
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| Protein sequence | MAWITSVART LFVPHIRRMA ELVIRRGLEE PDTSGTFVPH RPARPDKVEG GKRFRIVSDY
QPAGDQPTAI ADLVEGIRAD DKTQVLLGVT GSGKTFTMAQ VIEATQRPAL ILAPNKILAA
QLYGEMKSFF PENAVEYFVS YYDYYQPEAY VPRSDTYIEK ESSVNEAIDR MRHSATRALL
ERDDVIIVAS VSCLYGIGSV ETYSAMIFDL KVGTTVDSGE IIRKLVALQY KRNDAAFSRG
NFRVRGDNLE IFPSHYEDVA WRISFFGDEI EQIVEFDPLT GKAGTKLTAI RVYANSHYVT
PGPTMKQAAD AIRFELTERL KELVAEGKLL EAQRLEQRTN FDLEMIAATG SCAGIENYSR
FLTGRLPGEP PPTLFEYLPD NALLFVDESH QTVPQIGAMA RGDHRRKLTL AEYGFRLPSC
IDNRPLRFNE WDAMRPQTVA VSATPGGWEM EQAGGVFAEQ VIRPTGLIDP PVLIRPVEDQ
VQDCINECRE TAAKGYRTLV TTLTKRMAED LTEFMHEAGL RVRYMHSDVE TLERIELIRD
LRLGVYDVLV GINLLREGLD IPECGLVCIL DADKEGFLRS ETSLIQTIGR AARNVDGRVI
LYADRMTGSM ERAIAETDRR RAKQQAYNEE HGITPQTIKR NIHDIVADTA SRDGVVVDTG
DDERNNLVGH NLRAYIEDLE KRMRAAAADL EFEEAGRLRD EIRRLEATEL GLPEGERKAP
IVGRSNEGKP GTRKTRYGKS QKTKWGK
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