Gene Saro_2770 details

Gene Information

• Locus tag: Saro_2770
• ID: 3916930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2989657
• End bp: 2990319
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640445549
• Product: extensin-like
• Protein accession: YP_498040
• Protein GI: 87200783
• COG category: [S] Function unknown
• COG ID: [COG3921] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCCGCG CGATCCTCGT CGTGACGCTT ACGGCTCTTC TTGCCGGTTG CATCGGCTCG 
CCCGACACGC CGCGAAGGGA TGCCGCGCGG CGCACCGGCG CGACTGTCTC GCAATCGCCG 
CAAGCCCGGG CGTGCCTTGC CGGCCTGGGG GCGACGCAGG CCAGCTTCAC GCCGCTGGCC 
GATCAGTATT ACGGAGCGGG GTGCTCGACG CTGGGCACTG TCAGGCTGGG ATGGTTGCAG 
GGCGACGAAG GACGGCTCGA GGTCGCCAAT CTCGGCCCGG TCTCGTGTCC GGTGGCCACC 
GCCTTGCAAG GCTGGGCGCG GTTCGGTGTG GACAGGGCGG CGCGACAGAT ACTCGGCAGC 
GCGCTGGTCC GGATCGAAAC GATGGGCAGT TATTCCTGTC GGAACGTGGC GGGGACTTCG 
CGCCTTTCAG CCCACGCAAC CGCCAATGCA GTCGACATTG CCGCGTTCCG GCTGGCGGAC 
GGCCGGCGTA TAAGCGTGGT TTCCGACTGG AATTCACCCT CGCCGCAGGT CCGCGCATTC 
CTGCGCACGG TGCGCGACAG TGCCTGCAAG CGGTTCGGCA CTGTGTTGAC GCCCGATTAC 
AACGAGGCGC ACCGAGATCA CCTTCACCTC GAACCCGGAG GCCTCAGGCC GTTCTGCCGC 
TGA 

 

Protein sequence

MVRAILVVTL TALLAGCIGS PDTPRRDAAR RTGATVSQSP QARACLAGLG ATQASFTPLA 
DQYYGAGCST LGTVRLGWLQ GDEGRLEVAN LGPVSCPVAT ALQGWARFGV DRAARQILGS 
ALVRIETMGS YSCRNVAGTS RLSAHATANA VDIAAFRLAD GRRISVVSDW NSPSPQVRAF 
LRTVRDSACK RFGTVLTPDY NEAHRDHLHL EPGGLRPFCR