| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2718 |
|---|
| Symbol | |
|---|
| ID | 3918493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2949732 |
|---|
| End bp | 2951636 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640445496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_497988 |
|---|
| Protein GI | 87200731 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3567] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01555] phage-related protein, HI1409 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG TGACCAACAT CCTCGACAGC CTCCGCAATG CGCTCACAGG CCAAGGCACG
TCGCGCGATC CCCGCACCGC ATCGGCGTAC TGCGCGACCC GCGCCCTCAC CCAGCACGAA
ATCCATGCCG CCTACTCCGG CTCTGGCCTG CTCAAGAAGA TCATCCAGAT CCCACCGCTC
GACATGGTGC GGGAATGGCG CGACTGGTCC GGCCTCGACG ATGACCAGGC CGCGCTGATC
TGGGACGAGG AAAAGCGGCT CGGGCTGCGC GAGAAGGCGA AGCTTGCCGA GACCCTGCGC
GGACTTGGCG GCGGCGCGTT CATCCTCGGC CTGCCTGGTC AGCCTGCCAC GCCCGCACCG
AAAGCGGTGG CCAAAGGTGG TCTCGCCTAC ATCAACGTCG TCTCGCGCTG GCACCTGACG
TTCGATGCGC TGCAGGACGA TGCCCGCCTT CCCGGCTACG GCGAGCCGCA GATGTGGCGC
ATGCAGACCG CAACCGGTCA GCAGCTCATT CATCCCTCGC GCGTCGTGAC GTTCCGTGCC
GACACCAGCG GTTCCCTGAT TGCGAGCATG GCCAGCCAGG ACGACGCCTA CTGGGGCGAA
AGCAGGCTGG AGCAGGTCCT TGAAGCAGTG AAGGACAGCG ACACCGCGCG CGCGTCGTTC
GCAGCGCTGC TTCACAAAGC CCGCCTAACC CGCATCGGTA TTCCGAACCT GTCGGACATC
GTGTCGACCA GCGACGGAGA GAGCCGCATT GGCGCCCGCC TCGGCATGAT CGCGCTGGCG
GAAAGCATGT ACAACGCGGC GGTCTACGAC AGCGGAAATG GCGCCGACGG CCCGGCGGAG
AAGATCGACG ACGTTGCCTA CAACTTCGCC GGGGCCAAGG ACGTTCTCAA CGCCTTCGCC
GAGTTCGCCG CCGCGATTTC CGACATCCCG GCGACGCGTC TGCTCGGCCG CGCCCCAGAA
GGCATGAACT CGTCCGGCGA CAGTCAGCAA AAGGACTGGT CGAAAAAGGT CCGCGCGATG
CAGACCCTCG AACTCGGGCC CTGTCTCGAC CGCGTCGACG CTTACCTCGT GCCCTCCGCG
CTGGGGCGCG CCGAACCGAA CGCCAGCTAC GCATTTGCCC CGCTCGATGT CGAGACCGAC
AAGGAGCGCG CCGATCGCTT CGCCAAGCAG ATGGAAGCGG CCGAGAAGCT GGCCGGCCTC
AACGCAATGC CGGAGCAGGC ATTCAACCGC GGCATCCAAT CGCTGATGAT CTCTGAGGGC
TACCTCCCCG AACTTGAGGC GGCGCTGTCC GATATCCCCG ACGACGAGCG CTATGGCATC
GTTGCCGATC CCTCGCCCGA GGACATGAAT CCCGATGGGA CGAAAGGAGG TGATCCGGCT
ATCTCGGCTC CGGGCGGGAC CTCGACCACC CCGCCTGTGG CTGCCAACGA CGCCAGCCCG
CGACCGCTGT ATGTCCATCG CAAGTTGCTG AACGGCGGTG AGCTGATCGA CTGGGCGAAA
GCACAAGGCT TCGACGTGAC GGTCCCTGCC GACCAGCTCC ATGTCACCGT GCTATATTCT
CGTGCCGCTG TCGATCCGAT GGCGATGGGC GAAGGATGGT CGAGCGATCC CGATGGCGGT
CTGGTGATCA AGGCTGGCGG TCCGCGCGCG CTCGAACGGT TCGGAGAAGG CGCCGTCGTC
CTCCAGTTCG CGTCGTGGTC GCTGCAGTCG CGCCACGACG AGATGGTGCG CGCCGGCGCA
AGTCACGACT ATCCGGAATA CCTGCCGCAC GTGACGCTGA CCTATCAGGC ACCGGAAGGC
ATCGACCTCG AAGCGATCAA GCCGTTTTCC GGAGAGTTGC GCTTCGGGCC TGAGGTGTTC
GAGCCGCTGG ATCTGGACTG GAAGTCGAAG ATTACGGAGG AGTGA
|
|---|
| Protein sequence | MGTVTNILDS LRNALTGQGT SRDPRTASAY CATRALTQHE IHAAYSGSGL LKKIIQIPPL
DMVREWRDWS GLDDDQAALI WDEEKRLGLR EKAKLAETLR GLGGGAFILG LPGQPATPAP
KAVAKGGLAY INVVSRWHLT FDALQDDARL PGYGEPQMWR MQTATGQQLI HPSRVVTFRA
DTSGSLIASM ASQDDAYWGE SRLEQVLEAV KDSDTARASF AALLHKARLT RIGIPNLSDI
VSTSDGESRI GARLGMIALA ESMYNAAVYD SGNGADGPAE KIDDVAYNFA GAKDVLNAFA
EFAAAISDIP ATRLLGRAPE GMNSSGDSQQ KDWSKKVRAM QTLELGPCLD RVDAYLVPSA
LGRAEPNASY AFAPLDVETD KERADRFAKQ MEAAEKLAGL NAMPEQAFNR GIQSLMISEG
YLPELEAALS DIPDDERYGI VADPSPEDMN PDGTKGGDPA ISAPGGTSTT PPVAANDASP
RPLYVHRKLL NGGELIDWAK AQGFDVTVPA DQLHVTVLYS RAAVDPMAMG EGWSSDPDGG
LVIKAGGPRA LERFGEGAVV LQFASWSLQS RHDEMVRAGA SHDYPEYLPH VTLTYQAPEG
IDLEAIKPFS GELRFGPEVF EPLDLDWKSK ITEE
|
|---|
| |